Gene detail

Detail information of GWHGAAEX011154/evm.TU.scaffold_354.3

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|384152163\|ref\|YP_005534979.1\|	3.00E-19	cytochrome P450 [Amycolatopsis mediterranei S699]
KOG	KOG0157	3.00E-117	Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nr	gi\|657994290\|ref\|XP_008389448.1\|	1.97E-124	PREDICTED: cytochrome P450 704B1 [Malus domestica]
Swissprot	tr\|Q9C788\|C70B1_ARATH	8.00E-118	Cytochrome P450 704B1
trEMBL	tr\|A0A059D7W7\|A0A059D7W7_EUCGR	4.00E-123	Uncharacterized protein {ECO:0000313\|EMBL:KCW86574.1}
trEMBL	tr\|A0A059D7W7\|A0A059D7W7_EUCGR	3.00E-50	Uncharacterized protein {ECO:0000313\|EMBL:KCW86574.1}
TAIR	AT1G69500	3.00E-117	cytochrome P450, family 704, subfamily B, polypeptide 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000346	59277	69349	-

Transcript Sequence
>GWHTAAEX011154 AGCTGAAGTTCACACAAAGATGGTTTTTCCTCTTCCCCCTCCAATATAAACAAGCTAACTTAGCTTGAATCTTGAAGAGCCAAAGGAAGCAGACAATGTCTTCTTCTTCTTCATCTACTTCTTTATATACGCGCGCTCCCTATTTTTTACATAATTGCAATACGGCCCTTTCTTTACTATTTGCAATTTTGCTAATAGGCTGGGTGCTGATGCATAGATGGGGGCAGAGAAACAGAAAGGGTCCAAAGACATGGCCTCTGATAGGGGCGGCCATAGAACAGTTGAGGAACTATGAGCATATGCATGATTGGGTTGCCTCTTATCTATCTGAATTAAGGACTATCAGTGTCCCTATGCCCTTCACTTGCTACACTTACACTGCAGACCCCAAAAATGTGGAGCACATTCTCAAAGCCAACTTCAAAAACTACCCCAAGGGGGAGGCTTATAGAACGTACATGAACGTTTTGTTGGGGGATGGAATATTTAACGCTGACGGAGAGCTGTGGAGAAAGCAAAGGAAAACTGCCAGTCTTGAATTTGCTTCCAGAAACCTCAGAGAGCTCAGCACAGCAGTGTTTAGAGAATATGCCTTGAAGCTTTCTTCAATATTATGCCAGAAGTCCTGCACAGATCATCAAAGTGTAGATATCCAGATACAGCATGACATACTGTCTAGGTTCATCGAGCTCGGCATTACTGACCATGAGAGTGATTTCAGAACAGAAAAAAGCCTAAGAGATGTTGCACTCAACTTCGTGTTTGCAGGAAGGGACACAACAGCAACTACCCTCTCATGGTTTATATATATTCTAGTCACACACCCTCAAGTGGAAAGAAAACTCTATAGTGAGCTGAAGATATTTGAAGACTCAAGGGCTAAAGAAGAAAACATAAATTTGGCTGCATATACTATAGAAGATATGGATTCATTCACAAAGAGGTTATCACAGTTTGCAAACCTTTTAGACTACGATTCATTGGGAAGATTACACTATTTGCATGCAAGCATCACAGAAACACTAAGGTTGTATCCTGCTTTTCCCCAGGACCCAAAAGGGATCCTAAAGGATGATGTGTTGCCTGACGGAACAAAAGTGAGAGCAGGTGGAATGGTAACGTTTGTTCCCTACTCAATGGGAAGAATGAAATGCATCTGGGGGGCCGATGCATTTAATTTTCGTCCAGAGAGATGGCTGAAAGAAGATGGCATCTTTCAAAATAATGTCTCTCCTTTTAAGTTCACTGCATTTCAGGCAGGGCCAAGGATGTGCCTAGGGAAGGACTCTGCTTATCTACAAATGAAAATGACATTGGCTATACTATGCAGATTCTTCGACTTCAAACTTGTGCCTCATGGTCCCCCAGTTCACTATAGAATGATGGCCATACTTTCAATTGCACATGGCCTCTATGTCCTTGTTTCTCCACGAAGGCCCTAATGTTAATGCATTTAAACTTATTTACATTTAATTTCTTCGATACAAAAGCATATTATTTTATTCTCGCAGGTAAAAATTGCAGACTTTGGAACATTTGAGGAATCATGATTTGATAAATGTAGCTCTCAGAACAAAATGAAAGTATTAAGGTGCTACTGAACAGCAGTTGTGTTGCAATAAAGAAATATTTTTCATTAAAAAATAAAACAAAATGATGCTTGAAACATTGGTTAAGTCTTTAATGTCTTTTCATATTTGCTTACGAGTAAGGCTACACAACCCCATCCATGAAATCTAAGGTTATGTGTTAGTAGCATTTTTTGTGCAAATATATTGGATAGAATGTATGACTAAAAACGGCCTTAAGCTTTCACTCTTCCTTCACCAGCCTATTTTTCTACTGGTGCCAGAGCTCATAGATTTTTTGAGCTGTGGGTACAAAAACCTTGCATTTCTCTTTGTATTCTAATAGTGAAGATTTTCATTTCTCTTTGCCTCAGGCGATTGCATCAAAAAATTATTAGGAATTCTCAATCCAATTTTCCATAGCCTTTTATGAGCACTTGATAAACAATAACTGTCGGGCACAACACCAGCAAAAAATAAGCTTTTCTTTGATTGCTTGCTAATTGATCCAGTTTAAATATAAATAGTTGTGGCATCCAGGAAAAGAACTTTATATTATAAAATAAACTCAAAAAGCTTATAAGTTCAAATTTAAAAATGATAAGGTACAATTATTCTTGAGTCTCTACATCATTTATTTGGATAAACATAAAAAATAATGTAGACCATGAATGGTATCTACGGTAATACTGGCATAAACAATGTAAGCCAAAACCAATTCTATAGCTTGTTCCGAAAAAATTAAGTTTTAATAAAATGGCTTGACCTCTCATTTTAAGTGTCTACGTAGCCAAAGGGAAACAAACCACATGCACTTTTATAAAGAATAAAGTAGACGGAATTGTAATAGGCCACAAAAAAGGA

Network for GWHGAAEX011154

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	49	176	5.00E-06
PF00067.21	p450	182	424	1.70E-44

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP704B1

KEGG pathway

KO	Enzyme	pathway	mapID
K20495	CYP704B1	Metabolic pathways	map01100
		Fatty acid degradation	map00071
		Synthesis and degradation of ketone bodies	map00072

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	Molecular Function	heme binding
GO:0005506	Molecular Function	iron ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.080
SRP064423	SRR2545915	Juvenile tuber	6.860
SRP108465	SRR5643513	five period of Gastrodia elata	3.070
	SRR5643514	five period of Gastrodia elata	9.100
	SRR5643515	five period of Gastrodia elata	4.670
	SRR5643524	five period of Gastrodia elata	6.300
	SRR5643525	five period of Gastrodia elata	8.590
	SRR5643528	five period of Gastrodia elata	5.400
	SRR5643658	five period of Gastrodia elata	12.960
	SRR5643659	five period of Gastrodia elata	31.750
	SRR5643660	five period of Gastrodia elata	42.190
	SRR5643661	five period of Gastrodia elata	28.540
	SRR5643662	five period of Gastrodia elata	29.940
	SRR5643663	five period of Gastrodia elata	23.680
	SRR5643664	five period of Gastrodia elata	28.080
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.990
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.150
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.610
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.070
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.440
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.960
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.970
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.120
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.840
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.840
SRP279888	Gastro	Gastrodia elata tuber	48.87
	Juven	Juvenile tuber	8.90
	Mother_Gastro	Mother tuber of Gastrodia elata	0.57
	Mother_Juven	Mother tuber of Juvenile	3.49