Gene detail

Detail information of GWHGAAEX011157/evm.TU.scaffold_354.6

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0891	2.00E-97	DNA-dependent protein kinase
nr	gi\|743879604\|ref\|XP_010908440.1\|	0	PREDICTED: uncharacterized protein LOC105034835 [Elaeis guineensis]
Swissprot	tr\|Q9FR53\|TOR_ARATH	1.00E-39	Serine/threonine-protein kinase TOR
trEMBL	tr\|M0SJ91\|M0SJ91_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P30770_001}
TAIR	HS14719394	2.00E-97	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000346	120778	126104	+

Transcript Sequence
>GWHTAAEX011157 ATGAAGGCAAAAGCATGCTTGAAGCTTTCTTCTTGGTTGAGTCTGGAGAATTTAAACATAAATTTTAAAAGTGTAATAACTAAAGTTCATGAAGATCTTACTTTATCTAGAGCAAATGACACCTCAATTTGCAGCAAAGAGTTTTTTTTATTTGCTAATAGCAAAGTGCCAGACACTAAGTTGAACGCTGCTCTCGAGGAGATAGTTGGTACCTCAATAAAACTATCCTGCAACATTAGTCCCAAAATGGGAAAAGCATGGCTTGCTTATGCTTCTTGGTGTTTTACCAACGCTAGGAACTCTCTTTTGGAACATGCCTCTGAATGTGAGTCATTTTCCTTATTTTCAATCCTTAATGAAGAGACTTCACCAGCCAGGTTCCAGCTGACTAAAGATGAGAAGTCCAAGGTCAAGTATATTATTTCAGATATTTATCAAATAAAAGATTGCATGGAAATCAAAACAGACCAAGGAAGTGTTCATCATAACACAATTTCTTATTCTGATTATCAAGCATCCCTTGATTCATTAGTGCATGAAACTACTCACTTAATGGAAGCTGCAGCTGGTGCACCTGGCTTTGAATCATTGGATGGTGAATGCCCATCTATTACTTTATTCTCTGAATTGCAAGCACTTTTTATTCGCAAAATTGCAGATATAGAGAAGAGTGATACATCATATATTCAAAACTTGATTGATATTTGGTGGTCATTGAGACAGAGAAGGGTTTCATTATTTGGCTCTGCTGCTCGTGGCTATTTTCAATTCCTTTCACTTTCATCATCCGGATTAAAGGAAAGTAGCAGTACCAACATTCATTCTGATTACTTGATTGAAAAATCTAGGAGCTGCACTCTTCGAGCAATGCTATATATTTTAGAAATTCTTTTTAATTATGGTATTGAATTAGAGGAAACCCTTAACCATGGTTTTGCATCTGTTCCTCCATTGTTATGGCAGGAAATCACACCCCAGTTGTTTGCTCGATTAAGCTCTCATCCTCAACAAACTGTTAGGAAACAGATTCAGAGCCTCTTTATGATGCTGGCCAAACTATCACCTTGGTCTATTGTTTATCCTTTGTTGGTCGATATAAAGTGTTATGAAGACCAATCCTCTGAGGAGCTTCAGAGTACCTACACTTACTTGACTAATTTGCACCCAAAGTTGATTCAAGATGTTCAGCTTGTCTTTAATGAACTTGGTAGCATTACTACTCTGTGGGAAGAACACTGGCTGGGTACCCTACAAGATCTTCGTATAGATGTTGTAAGGCGTATCAACATGCTCAAAGAGGAAGCATCACGAATTGCTGAGAATTCTACCCTTACTCATAGTGAAAAGACCAAAATAAATGCAGCAAAATATTCAGCTGTGATGGCTCCGATTGTTGTTGTCTTGGATCGTTGTCTAGCTTCTACTTTTAGTGAGGCAAAGACTGTGCATGAACAATGGTTCCAAAAGGAGTATGGTAAACTATTAAAATCTGCTTTTGTATCCTTTAAAACTCCTCCATCTTCAGCAGCACTTGGCGATGTGTGGAGCGCTTTTGATGCAATTGCATCATCTTTAACAATCCATCTGAAAAAATCATTCTTCTATTTAAGCGAGGTAGCTCCAAGTTTGTCATTTCTTTCATCTTCGGATGTACCAATGCCCGGTCTTGAGAGAGAGGTTTCACCACTTGATTCCAGTGGAAGTACCGTTGCTGTTCAAGGGATTGTTTCCATATCTTCCTTCAATGAAGAGGTTGAAATATTATCAACAAAAACAAGACCCAAAAAACTAGTGTTACTAGGATCTGATGGTCAGAAGTATACCTATCTTCTTAAAGGCCGAGAAGATTTACGCCTTGACGCACGAATCATGCAACTATTACGGACAATTAACAGTTTCTTTGCTTCATCAGCTGAAGGGCGTGGCCATTCTCTTGGCATACGCTATTACTCAGTGACCCCAATCAATGGTCAAGCTGGGCTGATCCAGTGGGTTGACAACGTGACTAGCATTTATAGTGTTTACAGGTCTTGGCAAAACAATAACCATTTGGCTGAATTTTCTGCAATTGGTACAACTAATCTTAGTAATCCTGTTCCATCGGTGCCAAGGCCAAGTGATATGTTCTATGGGAAAATCATACCCGCACTTAAGGAGAAGGGTATTCGAAGAGTGATTTCTCGAAGAGATTGGCCACAAGAAGTTAAAAGAAAAGTACTTCAAGATCTTATGCAAGAAACCCCAAGGCTCCTTCTTTGGAAGGAAATGTGGTGTTGTAGTGAAGGATTCAAAGCTTTTCATTTGAAGACAAAGAGGTATTTCTTACTTGTTAGAGTAATATTTCAAATACACATGATCAATATTAGTGGCATTGCAGATTTTTCTTCCCATCGTTTCACTAATGGTATACTAAAGTAG

Network for GWHGAAEX011157

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00454.26	PI3_PI4_kinase	607	682	3.50E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K08873	SMG1	mRNA surveillance pathway	map03015

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	22.960
SRP064423	SRR2545915	Juvenile tuber	7.220
SRP108465	SRR5643513	five period of Gastrodia elata	3.030
	SRR5643514	five period of Gastrodia elata	3.640
	SRR5643515	five period of Gastrodia elata	3.780
	SRR5643524	five period of Gastrodia elata	3.980
	SRR5643525	five period of Gastrodia elata	3.930
	SRR5643528	five period of Gastrodia elata	2.860
	SRR5643658	five period of Gastrodia elata	3.000
	SRR5643659	five period of Gastrodia elata	2.480
	SRR5643660	five period of Gastrodia elata	4.600
	SRR5643661	five period of Gastrodia elata	3.560
	SRR5643662	five period of Gastrodia elata	2.950
	SRR5643663	five period of Gastrodia elata	2.610
	SRR5643664	five period of Gastrodia elata	2.930
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.580
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.200
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.970
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.820
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.800
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.370
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.970
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.970
SRP279888	Gastro	Gastrodia elata tuber	5.35
	Juven	Juvenile tuber	10.24
	Mother_Gastro	Mother tuber of Gastrodia elata	5.30
	Mother_Juven	Mother tuber of Juvenile	9.87