Detail information of GWHGAAEX011164/evm.TU.scaffold_358.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743769635|ref|XP_010915112.1|1.13E-11PREDICTED: FACT complex subunit SSRP1-A-like isoform X1 [Elaeis guineensis]
Swissprottr|Q39601|SSRP1_CATRO2.00E-07FACT complex subunit SSRP1
trEMBLtr|A0A0A0LG27|A0A0A0LG27_CUCSA2.00E-09Uncharacterized protein {ECO:0000313|EMBL:KGN59592.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000003507972399318+
Transcript Sequence

Network for GWHGAAEX011164

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.300
SRR2545915Juvenile tuber30.470
SRP108465SRR5643513five period of Gastrodia elata1.320
SRR5643514five period of Gastrodia elata1.280
SRR5643515five period of Gastrodia elata0.530
SRR5643524five period of Gastrodia elata1.080
SRR5643525five period of Gastrodia elata0.400
SRR5643528five period of Gastrodia elata0.380
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata2.590
SRR5643660five period of Gastrodia elata2.520
SRR5643661five period of Gastrodia elata1.700
SRR5643662five period of Gastrodia elata1.020
SRR5643663five period of Gastrodia elata1.410
SRR5643664five period of Gastrodia elata0.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.560
SRR6049655Rhizomagastrodiae_C368-T10_good_10.210
SRR6049656Rhizomagastrodiae_C368-T07_good_11.080
SRR6049657Rhizomagastrodiae_C368-T07_good_10.560
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.280
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.370
SRR6049665Rhizomagastrodiae_C368-T10_good_10.370
SRP279888GastroGastrodia elata tuber 2.88
JuvenJuvenile tuber0.95
Mother_GastroMother tuber of Gastrodia elata 1.45
Mother_JuvenMother tuber of Juvenile 0.50