Detail information of GWHGAAEX011168/evm.TU.scaffold_3593.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33036.00E-15Predicted alpha-helical protein, potentially involved in replication/repair
nrgi|672163062|ref|XP_008801362.1|1.84E-25PREDICTED: DNA replication complex GINS protein PSF1 isoform X3 [Phoenix dactylifera]
trEMBLtr|J3M7S7|J3M7S7_ORYBR1.00E-25Uncharacterized protein {ECO:0000313|EnsemblPlants:OB05G26510.1}
TAIRAT1G801906.00E-15partner of SLD five 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000035853331162-
Transcript Sequence

Network for GWHGAAEX011168

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms87.290
SRR2545915Juvenile tuber108.570
SRP108465SRR5643513five period of Gastrodia elata22.340
SRR5643514five period of Gastrodia elata17.440
SRR5643515five period of Gastrodia elata18.920
SRR5643524five period of Gastrodia elata20.130
SRR5643525five period of Gastrodia elata31.710
SRR5643528five period of Gastrodia elata25.680
SRR5643658five period of Gastrodia elata26.360
SRR5643659five period of Gastrodia elata30.510
SRR5643660five period of Gastrodia elata44.700
SRR5643661five period of Gastrodia elata41.170
SRR5643662five period of Gastrodia elata34.810
SRR5643663five period of Gastrodia elata43.130
SRR5643664five period of Gastrodia elata41.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.010
SRR6049655Rhizomagastrodiae_C368-T10_good_118.250
SRR6049656Rhizomagastrodiae_C368-T07_good_125.410
SRR6049657Rhizomagastrodiae_C368-T07_good_122.720
SRR6049658Rhizomagastrodiae_C368-T04_good_112.000
SRR6049659Rhizomagastrodiae_C368-T04_good_114.590
SRR6049660Rhizomagastrodiae_C368-T01_good_119.100
SRR6049661Rhizomagastrodiae_C368-T04_good_110.920
SRR6049662Rhizomagastrodiae_C368-T01_good_113.700
SRR6049663Rhizomagastrodiae_C368-T01_good_110.100
SRR6049664Rhizomagastrodiae_C368-T10_good_118.170
SRR6049665Rhizomagastrodiae_C368-T10_good_118.170
SRP279888GastroGastrodia elata tuber 33.34
JuvenJuvenile tuber31.55
Mother_GastroMother tuber of Gastrodia elata 20.23
Mother_JuvenMother tuber of Juvenile 29.80