Gene detail

Detail information of GWHGAAEX011171/evm.TU.scaffold_36.4

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743814289\|ref\|XP_010929989.1\|	7.69E-30	PREDICTED: dentin sialophosphoprotein-like isoform X2 [Elaeis guineensis]
trEMBL	tr\|I1MYL1\|I1MYL1_SOYBN	4.00E-27	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G01520.1}
TAIR	AT4G00580	1.00E-13	COP1-interacting protein-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000036	70579	111096	-

Transcript Sequence
>GWHTAAEX011171 ATTTCCTGTCTGCATTAACCTCGATTAAACCCATGCCCTTTAGATTGCACCATTTCTGCATCCTCTCTCGCAGTCCGCATCTGTTTCACTGCCAGCGATGGACGAGACCTTGCCTTCGCCTCCTGATCTTCTCCATGCCATCTTCGTCGACACAAATATCGACACTCATCTCGCTTTGGTTGTCTCCCTTCACGACACCATCAGCGATGTCAAAGCGAAGATAAAAGCCGAACATGCTATTTGTTTCCAGGATATCGGGGACATAGCCGTTGAAGCAATTAAGGTGAAGCGCCGAGGTTTCTTCTATAACCTAGCAGATTCTATGCCTGTCAGATATGCTTTTGATGGAGTCAAGGGGAGTTGGTTTATCAGCATTGATGCAGTTCCCAAATGCTCTCTCAAAAGTCAAATTGTACTTCCCAACAAACTCGCACATGAGCAATTTAAGAACCTTGAGTATATGGTTCCTGTATCCAGTGGGGACAAACATAAAGAGATTGTTTTTTGTGGGTTATCTCCTAAATATGGAGATGCAAGCAGGTTGTCAGCTTTTATTTCTATTGCACCAGTCGAGCATGAGAACCAGAGTTTAGCAGATGATTCTTTAAAGGAATTACCTGCTGTAGATCCCTTGTCTTTGCAAAATGGAAGAATTAGCCCAGTTCAAAACTTTCATATTCTTTCCAATGATGTGTTAACTCATGTTGATAAAAATATTAAAATATTGAATGAGTTGAAAACTAATGAAGCTCATTTGGGCGGAGTGGTGATATCCTCATGTGAACCAGAAAAAACTTTAGACAGTGATCAATACTTAAGTCATAACCCAATTGTTATGAGCATAGGCATTGAAAATAGACCAGATTTCCAAATCAATCAAGATAATGATGGGAAAAGAATGAATAATAGAAAGAAACTTGGAGATGAAGCTAGTGATGCCATGCCTCCAGCCCCTTTCTCTCAGAAAACGTTAGCTGAAAAAGGGAACGAGCCATTACATCATAAGGTACTTGAGAGCGAGTTCCAGCATTTTCCTGTGGAGAAGAAAAGGGTAATGAAGCTCAAGGATGATTACAGAACAGGGGGCAAATTCAATGAAAATGAAGGCAATGATGAGCCTAATAAATCAGAGATTGTTCCTCAGAATATTAAGCGCAATGAGAAAAAGGAAAATTTTACTACTTTCTCAGAGAGATCGCCCAGCAAGTTGCCCCATGAGAACGCCATTTCTCTTCAAAATTCCTCAGTTGAAAGATGGAGTAAGAAAAGGAAAAGGAAGCCATCCAACTCTCATGAAGAAGCTCATCTTGTTATGCCACCTGGAGTTGCTTCAATCTTGCCAGAAAATTTCAACGAACCTGATAATGATAAATCAATACCAAACGATGGAGATACGGCCATTGAAGGTGATGCTACAAAATTTTTGAAAGTTTCCATTCAGAATAAAGCAAAAATTTCCCTGGACAGAAATAATGAACCTACTGTGGAAAGGTATCAAGTCAATCTTGAAGATCATAGTGAAAGGCATGTGAATCAAGATCAAGAAACCAGTGTTGATGCCAGCCTTAATGGACCTGAAGAGGCCAGAATTTCTTCACGAATAACCTCTAAAATTTCATCCAAGTCATACTGCAGCTCAGAAAGATTACCAAGTAAACTACCCCATGATGCTAGCATCTCTCTTCAAAATTCCCCAGTTGAGAAGCATGCTAGAAAAAAGAAAAGGAAGGCATTCAAACTCCATGAGGAGGCTCTTCCTCTTGTACCCACTGAACCGAAAGTAGATGAATCATCGCTAAACAATGGAGTTATGGGCATAGTGCGTGATACTGCAAATTTACTTAAAGTTTTCTATCCTGTGGCTGTTAATAATGAGCCTAAAGATCAAAGTGAAAAGCATATGAATTCAAGCCAGGAAACCACTGTTAATGTCAGCCTAAAAGAACCTGTAGAGGCCAAAATTTCACCTTCTAATTTATACTGCAGCTCAGAAGGATTAGCTGGTAAATCACTTCATGAAAGTACCGTTTCTTTTCAAAATTTCCCAGTTGAGAAATGTACTATGAAGAGAGTAAGAAAGTCATCCAAATCTGACGAAGCGGTCCATCATGTTATGCCAACTGGTGCTGCTGCTAAAAGTTCTACAGAGCTTATCACTTGTCTGCAAGATCCCAATCTGAAAGAAACAAGGAATTCTATGGAAATAAATAATGAACCTATTGATGAAGTGGTTTTTCAAGCTATTCCTGAAGATCAAAATGAAAAGCATGTGACTTTGGATCAAGAATCCAATATTGACGCCAACCTAAAACCACCTGACCAGGTCAGGATTTCCTCATTAGTATCTTCTGATCTATCATCTAAGTTACACCGTAACTCAGTAGGATTAACAAACAAATTATCTCATGTGAATAACATGTCTCTTCAAAGTTTTCCAGTTGTAAAGCATACTAAGAAAATAAAAAAAAAGGCATCCAATTTTCATGAGGATACTCATCTTGTTATACCATCTGAAACCAAAGTCGTTAGGTCACTTCAAGTAATGGCAGATTCACAAAATCTTAGGAAAGGGGAAAAGGCTTCCGTCTCCTCAGGAAAACTTTCCAGTGGGCTAAATGTTAACGAATCATTGCTGAATGATGACAGATATATGAGCACAAAACTTGGTTCTGCTCAGATTTTGGAAGCTGCCAATCAGAAAGAAATCAGGCATTCTATGGAAGTAAATAAAGAACGCTTTGGAGAACAGGTATTTCAACTTAATACTAAAGGTCAAAATAACTTTCATGTGGATTGGATCCAAGAAAATGATGCTGATGTCAGTATTAAAGAACCTGAAGAGGCCAGAATATCTTCAAAAGCGGCCTCTGAATTTCCAGCTAAGTTACACTGCAGCACTGATAAGGTAATGAGTCATCAATCAAGCAAAATGTTAAAACACATGGAAGGAAGTGTTCAGCAAAGCAGAGCTTATGATGCTACAAAATGCATCACAGATGGATGTGGTTCTGTAGATGCAAAAGCAGGGACTTTTGCATTATCTGAAAAGCTCCCTTATAAGGAGCCATCCTCTATTGCAGTTTCCAACCAGGAGGGATCTGGCACTGGAGACTGTTTAACAAAAGCTGACTATAAACACCCAAGTAAGCCACAGCACAGGAGGAAAAAATCAAAAGCTGGCTCATCTAAAGTTGACAGATCTGCAGAACTAACAGGAAATAAAGATCATTTCCCTTTTGTTCCTGCTCAGGTGTTCTCTAATGAATTTCAGATAGACTCCAATGCTGTAAAATCTGATAAACAAGCTGATAAAAAATCTGATGGAGGCCATAATATAGATACTATGATTAAAGCATCCTTATCCTCCAAAAATGTTTCTGACCAAGCTGAAGTCTCTAACTCGAATTCAGGCAATCATCTAATTAGCTTACCTTTTAATTCAAACAGAGTATCCAATGCACATGTTGAACAAGTTGCAGAGGAAGGAATTCCTTCGCTGACGGAAGCTCAAGCCAAGCCACGCAGCCGGAAAAAGCCCAAGGCAGAACTATCTAAACTTGAACCTCAAGAAATTTGTGATAATGTGTTAGCCAATGGACGGTCAGATCCATCCAAACATGCAAATGTGTTCAATCAGAAAATAGAACCTAATTCTGTATATGCAAAGGTGATGGTTCCTCAGTCTGATGAAAATTCTTCAATACCAGTTGATAAACCTCAGGTGAATCCATTAGATCCCACCTGTTACGAGCTACAAGATTTGTGCAAACAATCCAATTCCAAAATCACAATTGATGGCCATGTAGCCCAACATGAAGCTTTGGCAGATCCTCCCAAATCTAAACGTGACAAGAAGAAATCCAAAAAGGAAGAATTAAATCTGCGAGTATCTTCTGAAATGACTGAGCATAATACGGACCTTCGCAAGTTTAATGATTCCACCATAAACTTCCATGATTATTTTGCTCCCGGGGAAGGCAAACACAGTTCGAACGATCTCACAGCAGATCTTCCATCTATGAAATCGGTAGCAAGGAAATCAAGCAAGTCTAGCAGGAAAATAGAAATGAGCCAATCCATTCAGGAATCCCCCACTAACTTTGTACATAGTTCTTTAATTAAACAGAATGTGATTATTAATCAACCCCATGAAAGTGATAGTAATCAAGATTTAGTTGATGCTGTACATGATACTGCAGCCAAGGATTCTAAAACTGGTATTGCTGGCAAAGGTAAAAATGCAAAGCATTCGAGTAAGCAGAGCTTGCCTTCTGGTGCAATTGTTTCTGGCTCATCTCCTAATAATGATAAGAAGCTTCAGAATTATGGACCACCAGAACCAGAGGCTGTGGGGAGTAAGCGAGGTAAGAAAACTCCTACAGATAGGAAAAGGAAAGTTTATTCACTTTCACCCGATCAGGGAGTTGACAATATGGTTTCCAGAGGTAGTTTGCGGTACAAGGATCCCAATTCTTCAAATAATTTGAATGTTTCTCTGAGTGAAGGCATGGCAGCTTCAAGTGACAGCACTGAGGATTCTCCAAATAAGACAAAAATGCAATTTAAAATAGTTAGAAAAATTCCAACTAGAAAATTAAAGAAAACAGCGGGCAAAGCTGATGCTGAAAATGAGTTGTTGGCTTACTCAGGAAGGATATTCAGTGATGCTTCAGATACAAGCTCTGAGAGAGAAATTGACGCTTACAAAAGAAAGCTCGATATCAAGACTTCTTTTAATGGCTTGGACAATCAGCATGAGGAAGCGCAGAGAAAGACCAGCTCAATGGTACATCAAATGGATACAAACTCTTCGGGTGTGGACACAGATTCCTCTGGTTCTGCATCAGCTGAGCGCGAACAAGGTGAATTTAGCAAACAAGCTGACGATGGGATCGAAAATCATAGTAGATCCACCGGCTCTGTTAGTGCCATTCTGAAGAGCTCCAGTCACTACAGGAAGGTCAAGATTTCGGCTTCACAGTCTGAGTTTCCAGACACTGAGAGCCAGCCTATAGATGTGGTTCTAGAAACTCAGCCTGAATCTGATACACCGTGAAACCCTGGTTATCTGGTGGTATTTCGGTGGAGAAAACTCATAGGGAGAATTATAGAGCTGGCTAAAGGTAGGTTTCCTCAGCATTTTTAATGATAATATGTAGAATACTAACCTGCATTTGTCATTGTTTTATATGCTATGGAAGGCATAACCTGTTAGATTTAGGGTAAAATGCTTTATTAATGATCAAAGAATTTTTTTAAAGATTTCTATCCACTTCTTGGTTTATGTAATCAGGAAAGGCTCTCAAATTTAAGGACAGCATCCACTTTAGCATAACTAGTAATTATTGATAACGGTTTGGAATCGTAAAAAAATATCAGCAGCCTGTATGTTGGATAATACAAAAAGATCAATTGAATAATATTTGAGTTTTATCAAATGACATTTAATCTGAATGTATGATGTGCTTATAATTAGAATGTTATTAGTGACTTGAATGACA

Network for GWHGAAEX011171

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX011171
MDETLPSPPDLLHAIFVDTNIDTHLALVVSLHDTISDVKAKIKAEHAICFQDIGDIAVEAIKVKRRGFFYNLADSMPVRYAFDGVKGSWFISIDAVPKCSLKSQIVLPNKLAHEQFKNLEYMVPVSSGDKHKEIVFCGLSPKYGDASRLSAFISIAPVEHENQSLADDSLKELPAVDPLSLQNGRISPVQNFHILSNDVLTHVDKNIKILNELKTNEAHLGGVVISSCEPEKTLDSDQYLSHNPIVMSIGIENRPDFQINQDNDGKRMNNRKKLGDEASDAMPPAPFSQKTLAEKGNEPLHHKVLESEFQHFPVEKKRVMKLKDDYRTGGKFNENEGNDEPNKSEIVPQNIKRNEKKENFTTFSERSPSKLPHENAISLQNSSVERWSKKRKRKPSNSHEEAHLVMPPGVASILPENFNEPDNDKSIPNDGDTAIEGDATKFLKVSIQNKAKISLDRNNEPTVERYQVNLEDHSERHVNQDQETSVDASLNGPEEARISSRITSKISSKSYCSSERLPSKLPHDASISLQNSPVEKHARKKKRKAFKLHEEALPLVPTEPKVDESSLNNGVMGIVRDTANLLKVFYPVAVNNEPKDQSEKHMNSSQETTVNVSLKEPVEAKISPSNLYCSSEGLAGKSLHESTVSFQNFPVEKCTMKRVRKSSKSDEAVHHVMPTGAAAKSSTELITCLQDPNLKETRNSMEINNEPIDEVVFQAIPEDQNEKHVTLDQESNIDANLKPPDQVRISSLVSSDLSSKLHRNSVGLTNKLSHVNNMSLQSFPVVKHTKKIKKKASNFHEDTHLVIPSETKVVRSLQVMADSQNLRKGEKASVSSGKLSSGLNVNESLLNDDRYMSTKLGSAQILEAANQKEIRHSMEVNKERFGEQVFQLNTKGQNNFHVDWIQENDADVSIKEPEEARISSKAASEFPAKLHCSTDKVMSHQSSKMLKHMEGSVQQSRAYDATKCITDGCGSVDAKAGTFALSEKLPYKEPSSIAVSNQEGSGTGDCLTKADYKHPSKPQHRRKKSKAGSSKVDRSAELTGNKDHFPFVPAQVFSNEFQIDSNAVKSDKQADKKSDGGHNIDTMIKASLSSKNVSDQAEVSNSNSGNHLISLPFNSNRVSNAHVEQVAEEGIPSLTEAQAKPRSRKKPKAELSKLEPQEICDNVLANGRSDPSKHANVFNQKIEPNSVYAKVMVPQSDENSSIPVDKPQVNPLDPTCYELQDLCKQSNSKITIDGHVAQHEALADPPKSKRDKKKSKKEELNLRVSSEMTEHNTDLRKFNDSTINFHDYFAPGEGKHSSNDLTADLPSMKSVARKSSKSSRKIEMSQSIQESPTNFVHSSLIKQNVIINQPHESDSNQDLVDAVHDTAAKDSKTGIAGKGKNAKHSSKQSLPSGAIVSGSSPNNDKKLQNYGPPEPEAVGSKRGKKTPTDRKRKVYSLSPDQGVDNMVSRGSLRYKDPNSSNNLNVSLSEGMAASSDSTEDSPNKTKMQFKIVRKIPTRKLKKTAGKADAENELLAYSGRIFSDASDTSSEREIDAYKRKLDIKTSFNGLDNQHEEAQRKTSSMVHQMDTNSSGVDTDSSGSASAEREQGEFSKQADDGIENHSRSTGSVSAILKSSSHYRKVKISASQSEFPDTESQPIDVVLETQPESDTP

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	19.850
SRP064423	SRR2545915	Juvenile tuber	19.940
SRP108465	SRR5643513	five period of Gastrodia elata	9.070
	SRR5643514	five period of Gastrodia elata	10.300
	SRR5643515	five period of Gastrodia elata	9.170
	SRR5643524	five period of Gastrodia elata	10.800
	SRR5643525	five period of Gastrodia elata	5.880
	SRR5643528	five period of Gastrodia elata	7.510
	SRR5643658	five period of Gastrodia elata	6.510
	SRR5643659	five period of Gastrodia elata	8.440
	SRR5643660	five period of Gastrodia elata	8.580
	SRR5643661	five period of Gastrodia elata	8.030
	SRR5643662	five period of Gastrodia elata	7.170
	SRR5643663	five period of Gastrodia elata	7.660
	SRR5643664	five period of Gastrodia elata	6.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.520
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.300
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.030
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.510
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.030
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.290
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.290
SRP279888	Gastro	Gastrodia elata tuber	9.45
	Juven	Juvenile tuber	20.16
	Mother_Gastro	Mother tuber of Gastrodia elata	9.17
	Mother_Juven	Mother tuber of Juvenile	15.77