Detail information of GWHGAAEX011173/evm.TU.scaffold_36.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07732.00E-91Transcription factor MEIS1 and related HOX domain proteins
nrgi|672187148|ref|XP_008813264.1|1.51E-96PREDICTED: BEL1-like homeodomain protein 4 [Phoenix dactylifera]
Swissprottr|Q94KL5|BLH4_ARATH7.00E-92BEL1-like homeodomain protein 4
trEMBLtr|B2Y2H0|B2Y2H0_SOLLC3.00E-96BIPINNATA {ECO:0000313|EMBL:ACA61780.1} (Fragment)
TAIRAT2G237602.00E-91BEL1-like homeodomain 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000036277836281534+
Transcript Sequence

Network for GWHGAAEX011173

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07526.10POX761925.20E-34
PF05920.10Homeobox_KN2592983.10E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHB-BELL

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.060
SRR2545915Juvenile tuber5.430
SRP108465SRR5643513five period of Gastrodia elata14.180
SRR5643514five period of Gastrodia elata10.760
SRR5643515five period of Gastrodia elata8.550
SRR5643524five period of Gastrodia elata9.470
SRR5643525five period of Gastrodia elata57.060
SRR5643528five period of Gastrodia elata34.070
SRR5643658five period of Gastrodia elata56.140
SRR5643659five period of Gastrodia elata11.590
SRR5643660five period of Gastrodia elata17.230
SRR5643661five period of Gastrodia elata13.160
SRR5643662five period of Gastrodia elata16.630
SRR5643663five period of Gastrodia elata17.520
SRR5643664five period of Gastrodia elata24.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.850
SRR6049655Rhizomagastrodiae_C368-T10_good_110.220
SRR6049656Rhizomagastrodiae_C368-T07_good_116.180
SRR6049657Rhizomagastrodiae_C368-T07_good_118.280
SRR6049658Rhizomagastrodiae_C368-T04_good_115.070
SRR6049659Rhizomagastrodiae_C368-T04_good_117.830
SRR6049660Rhizomagastrodiae_C368-T01_good_113.910
SRR6049661Rhizomagastrodiae_C368-T04_good_116.650
SRR6049662Rhizomagastrodiae_C368-T01_good_114.830
SRR6049663Rhizomagastrodiae_C368-T01_good_113.230
SRR6049664Rhizomagastrodiae_C368-T10_good_119.970
SRR6049665Rhizomagastrodiae_C368-T10_good_119.970
SRP279888GastroGastrodia elata tuber 33.69
JuvenJuvenile tuber23.76
Mother_GastroMother tuber of Gastrodia elata 32.06
Mother_JuvenMother tuber of Juvenile 34.05