Detail information of GWHGAAEX011180/evm.TU.scaffold_36.23
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|672133569|ref|XP_008790410.1| | 4.31E-176 | PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q9SUG3|ITPK2_ARATH | 1.00E-162 | Inositol-tetrakisphosphate 1-kinase 2 |
| trEMBL | tr|A0A061FE52|A0A061FE52_THECC | 3.00E-167 | Inositol-tetrakisphosphate 1-kinase {ECO:0000256|PIRNR:PIRNR038186} |
| TAIR | AT4G08170 | 2.00E-145 | Inositol 1,3,4-trisphosphate 5/6-kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000036 | 907189 | 939450 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011180
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05770.10 | Ins134_P3_kin | 105 | 404 | 2.00E-141 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00913 | ITPK1 | Metabolic pathways | map01100 |
| Inositol phosphate metabolism | map00562 | ||
| Phosphatidylinositol signaling system | map04070 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046872 | Molecular Function | metal ion binding |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.440 |
| SRR2545915 | Juvenile tuber | 4.800 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.230 |
| SRR5643514 | five period of Gastrodia elata | 5.770 | |
| SRR5643515 | five period of Gastrodia elata | 6.940 | |
| SRR5643524 | five period of Gastrodia elata | 6.120 | |
| SRR5643525 | five period of Gastrodia elata | 10.020 | |
| SRR5643528 | five period of Gastrodia elata | 6.770 | |
| SRR5643658 | five period of Gastrodia elata | 7.990 | |
| SRR5643659 | five period of Gastrodia elata | 4.550 | |
| SRR5643660 | five period of Gastrodia elata | 6.880 | |
| SRR5643661 | five period of Gastrodia elata | 6.590 | |
| SRR5643662 | five period of Gastrodia elata | 9.300 | |
| SRR5643663 | five period of Gastrodia elata | 4.690 | |
| SRR5643664 | five period of Gastrodia elata | 4.600 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.590 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.490 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.680 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.820 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.080 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.320 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.590 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.820 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.250 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 8.550 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 8.550 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.12 |
| Juven | Juvenile tuber | 5.01 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 15.60 | |
| Mother_Juven | Mother tuber of Juvenile | 8.13 |