Gene detail

Detail information of GWHGAAEX011185/evm.TU.scaffold_36.32

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0242	0	Kinesin-like protein
nr	gi\|743836709\|ref\|XP_010936182.1\|	0	PREDICTED: kinesin-related protein 11 [Elaeis guineensis]
Swissprot	tr\|Q8S949\|NACK2_TOBAC	2.00E-89	Kinesin-like protein NACK2
trEMBL	tr\|M0TL83\|M0TL83_MUSAM	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT1G59540	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000036	1284709	1294464	+

Transcript Sequence
>GWHTAAEX011185 TCTCTCTCTCTCTCTCTCTTCCTGTGTGTTTTCATGGAGAAGATCTCAGTGGCTATCCGTATCCGGCCATCGACTGCTGAAGAAACTTTTGGAGAGCGGCAATGGAGGGTCGAGGATAACAGAATCTCGCTTTACAAATCTCTCAGCACTCCAATAAGCGGCATCACTTTTGCCTTCGACCATGTGTTTGAACAGAACTCCACGAATTCTTCCGTTTACAACCTCCTCATCAAATCATTAATCCACGCGGCCATCAATGGATTTAACGGAACTGCGTTTGCCTATGGGCAGACAAGCAGCGGGAAGACTTTCACCATGAACGGCTCTCAACAAGATCCCGGAATCATTCCCCAGGCAGTGAGAGATATCTTCCATACGATTCTTATGATCACCGACCGTGAGTTTCTAATTAGAGTTTCTTATATGGAAATTTACAACGAGGAGATCAACGACCTGCTTTCTTTGGGGAACCACAGGCTTCAAATTCATGAAAGCTTGGTGCGTGGAGTCTATGTAGCGGGTCTTAGGGAGGAAATAGTTGACAGCGCTGATCAAGTACTTGAGCTCATCAAACTTGGTGAAGCTAATAGGCATTTTGGTGAGACAAACATGAACATCAGAAGCAGCAGATCACATACTATCTTTAGGATGGTTATTGAAAGCAGTGCCAAGGGCTCCACCTCATCTGTTGATGCTATACGTGTCTCTGTTTTGAATTTGGTAGACTTGGCTGGATCTGAAAGGATAGCTAAAACAGGAGCCGATGGAGTTCGTTTGAAGGAGGGAAAGCACATTAACAAGAGTTTAATGATTCTTGGGAATGTGATTAACAAATTAAGTGAAAATGGAAAGCAAAGTGCACATATTCCCTATCGCGATAGCAAACTAACTCGAATACTACAACCTGCTCTTGGAGGAAATGCCAAAGCATCAATAATTTGTACGGTGGCACCTGAAGAGGTACATATAGAGGAAACCAAGGGCACTCTACAGTTTGCAAGCCGAGCTAAACGCATTACAAACTGCGCTCAAGTAAACGAGATTTTGACTGATGCTGCTCTGTTGAAACGACAAAAACAAGAAATTGAAGAACTTTGCAGAAAATTGCAAGGGCACCATTCTGAAGTATTGGAGCAAGTGATTTTAAAACAGAGGAACGACATGCACAATTCTGAACTTGAACGTGAAAAACTTGCAATGGAGCTTGAAGAAGAAAGGAAATCCCGTCAAGCACTCGAGCACCACATAGAAGAGCAACAAAAAATGATTATTTCTCTTAATGAAGTTCTTTTTTCTGACAAAGCTCGCAAGTCAAATCAGAAAGCTGTTCGTTCCTGTTCTAGCTATTATGAGGAAATGCATAGTTGGAACTACACGCCCGACAGTAATACCTTGAAAACCCCCATTATCAAAGCCAATGCTGACAACTTTGTTGTGAAGCGATCTAATCATTCTATGGCATTCGACTCAAGTCCACTACCAGAAAATTTTACTAACCTAGCTACTGAAGACTTGTGGCTGCAGTTAAACAAGGGCTTCAGAACAGACCTCGGTGCACTACCAATGACACCCAACTTAAAATATGGAGCATCTGAATCAACTGAGGGAACTGTGACGAGCGAGATGAGCACCAAGGAGAGAAGCTGCGGCCATAACTCGGCTTCTGCCTGCAGTCTCAAAGCTCAAGTAAACTCAATGAAGGACCAAAATGCCAGCTTGGAAAGAGATAACAGCAGGCTGAGAGAAGAGAACGCGTCCTTGGCACATGATGCGGCTGTCCTTGGAGCTCGGAACGAGGAGTTGCAGAAGGATCTAAGCTTCGAGAGGGAGAAATTCAGAGATCTTAAAGAGGAGATTCAGCGCTTTGGGCTAGCATTTACTGAGCGGGAGTGTCTGCTCAACTCCATCTATTCCAAATCTAAAGCCATGTTTCAGAATCTCTCTGCCTCGCACATTTTATGACGGTTTCCTCATCATTCAAACAAATGAAGAGATGTATATCCCTGTTTGCAATTGAATGCATTTGGATAAAACATGTAAGAACTTCTTTCCTTAATCTTATCCAGCTGATGCTGTATTTAAAAGTCATTTGATTACGTAAGTATTCATCCTTCTATATGATAAGAAAAATAAGTAAACAAAGGCATCACTAATTCTTTTCATTACTATAATTTGGTAAATTATCTAAGCAGATAAAAGTTCG

Network for GWHGAAEX011185

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	9	328	6.30E-109

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.830
SRP064423	SRR2545915	Juvenile tuber	2.290
SRP108465	SRR5643513	five period of Gastrodia elata	5.830
	SRR5643514	five period of Gastrodia elata	6.860
	SRR5643515	five period of Gastrodia elata	4.880
	SRR5643524	five period of Gastrodia elata	6.290
	SRR5643525	five period of Gastrodia elata	3.580
	SRR5643528	five period of Gastrodia elata	5.450
	SRR5643658	five period of Gastrodia elata	5.310
	SRR5643659	five period of Gastrodia elata	1.480
	SRR5643660	five period of Gastrodia elata	1.700
	SRR5643661	five period of Gastrodia elata	2.050
	SRR5643662	five period of Gastrodia elata	1.600
	SRR5643663	five period of Gastrodia elata	2.120
	SRR5643664	five period of Gastrodia elata	1.260
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.280
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.810
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.030
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.950
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.930
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.410
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.370
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.110
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.210
SRP279888	Gastro	Gastrodia elata tuber	1.54
	Juven	Juvenile tuber	3.75
	Mother_Gastro	Mother tuber of Gastrodia elata	7.31
	Mother_Juven	Mother tuber of Juvenile	3.75