Detail information of GWHGAAEX011188/evm.TU.scaffold_36.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|436838258|ref|YP_007323474.1|2.00E-31cytochrome P450 [Fibrella aestuarina BUZ 2]
KOGKOG01560Cytochrome P450 CYP2 subfamily
nrgi|672125215|ref|XP_008786022.1|0PREDICTED: cytochrome P450 78A5-like [Phoenix dactylifera]
Swissprottr|Q9LMX7|C78A5_ARATH0Cytochrome P450 78A5
trEMBLtr|A0A061E9M3|A0A061E9M3_THECC0Cytochrome P450, family 78, subfamily A, polypeptide 5 {ECO:0000313|EMBL:EOY01665.1}
TAIRAT1G137100cytochrome P450, family 78, subfamily A, polypeptide 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003614429301444786-
Transcript Sequence

Network for GWHGAAEX011188

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p450784864.80E-82
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP78A5

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
GO:0005506Molecular Functioniron ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms56.310
SRR2545915Juvenile tuber86.410
SRP108465SRR5643513five period of Gastrodia elata26.600
SRR5643514five period of Gastrodia elata51.610
SRR5643515five period of Gastrodia elata61.270
SRR5643524five period of Gastrodia elata46.400
SRR5643525five period of Gastrodia elata10.700
SRR5643528five period of Gastrodia elata2.540
SRR5643658five period of Gastrodia elata8.200
SRR5643659five period of Gastrodia elata52.090
SRR5643660five period of Gastrodia elata43.770
SRR5643661five period of Gastrodia elata57.170
SRR5643662five period of Gastrodia elata47.900
SRR5643663five period of Gastrodia elata30.040
SRR5643664five period of Gastrodia elata47.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.090
SRR6049655Rhizomagastrodiae_C368-T10_good_116.950
SRR6049656Rhizomagastrodiae_C368-T07_good_124.490
SRR6049657Rhizomagastrodiae_C368-T07_good_126.190
SRR6049658Rhizomagastrodiae_C368-T04_good_129.430
SRR6049659Rhizomagastrodiae_C368-T04_good_140.260
SRR6049660Rhizomagastrodiae_C368-T01_good_118.700
SRR6049661Rhizomagastrodiae_C368-T04_good_126.330
SRR6049662Rhizomagastrodiae_C368-T01_good_118.310
SRR6049663Rhizomagastrodiae_C368-T01_good_137.980
SRR6049664Rhizomagastrodiae_C368-T10_good_113.760
SRR6049665Rhizomagastrodiae_C368-T10_good_113.760
SRP279888GastroGastrodia elata tuber 21.99
JuvenJuvenile tuber23.03
Mother_GastroMother tuber of Gastrodia elata 64.75
Mother_JuvenMother tuber of Juvenile 8.86