Gene detail

Detail information of GWHGAAEX011190/evm.TU.scaffold_36.40

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|158523175\|ref\|YP_001531045.1\|	9.00E-35	alpha/beta hydrolase fold protein [Desulfococcus oleovorans Hxd3]
nr	gi\|743847807\|ref\|XP_010939193.1\|	1.78E-171	PREDICTED: putative methylesterase 11, chloroplastic [Elaeis guineensis]
Swissprot	tr\|Q9FW03\|MES11_ARATH	2.00E-145	Putative methylesterase 11, chloroplastic (Precursor)
trEMBL	tr\|B9H0H0\|B9H0H0_POPTR	2.00E-165	Uncharacterized protein {ECO:0000313\|EMBL:EEE85897.1}
TAIR	AT3G29770	8.00E-145	methyl esterase 11

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000036	1709845	1739405	-

Transcript Sequence
>GWHTAAEX011190 ATTTTTTATTACTAAACAGTAAACACTTCAATAGCTTTCTTCTCCGCCTTTATTATCTGACGGACGTGAAACGTCTGCTTCCCTTGCCAATTCCTTCGCAGTACGTTCTTTGAAAGGTCCAACATGGTTGCATGAACCCATCTCAGCATCGTCGCCTTCCTATCCATAGCTCCCGTCAGAGAAACGCAGAGGTCGTGCAAATCACCAGGACACAAGCTTGGACCGAAGAGAAATCATAAAATAAAATTTTAAAGCGGCTTTCTATTTTTCCTTTCTGACGAATTCCCAGGGGAAAACGGATCTGCTTCTCACTCGTCCCGTTTCTTCTTGATGGGAGCTATATTTTCATGCTTCAATGAGCTGGAGGGCTCGCAGCGGCCGGCGATGAGGCGGAAGAGGCCTGGATTTCAGCAGGATGCCTCTTTCAAGGCAGAGAGAGGGTCGAGCAAAAGATGGGATAAAGGGAGGTCGGCGACGGATGCGGAAGAGTCACTGATTCAAGAAGCGGCTGCGCTATTGCTAATGAAGCAACAACAAAACGGCGCCGAAGGTGCGGCAATCCCCTTCGATCGGTCAATCTCCATGAGGTATAATGGTATGGGGGCGAAGAAGCAATCGGGGCTAGCGAGAAGCTCTAGCTCTAGGCCAAGATCGTTTACTGATCCTGTTGTTGCGCCGCAGCAGTTTGTGAAGCTGGAAACAAAAATTGACGATTTAGAAACCAACCATATTGTTCTTGTGCATGGAGGTGGTTTTGGGGCATGGTGTTGGTACAAAACTATAGCACTGTTGCAGGATGCTGGATTCAAAGTCGATGCAATAAACCTTACTGGTTCTGGAATTCATTCTTTTGACACCAATAACATCACAAGTCTTCTCCAATATGTAAAGCCATTAACAAGTTTCCTTGAGCAACTTGGTGATACTGACAAGGTGATATTGGTAGGCCATGATTTTGGTGGTGCATGCATATCGTTTGCCATGGAAGCCTTCCCGGCTAAGATTGCTAAAACTGTGTTTCTGGCTGCAGCTATGCTGAAAGATGGGCAAAATGCTCTTGATATGTTCTCTAATCAGGAAGGCACAGGTGATCTGATGCGGCAAGCTCAAGTATTTCTGTATGCAAATGGAAACGATCAACCTCCTACAGCTATCGAACTTGAGAAATCATTGTTGAAAGATCTGTTTTTTAATCAAAGTCCCGTCAAGGATGTTGCATTGGCTTCTGTTTCTATGAGGCCAATCCCTTTTGCTCCAGTACTGCAAAAACTCGAGCTGACGGACTCAAACTATGGCTCAGTCAGGAGATTTTATATACAAACTAGCGACGATAAATCAATTTCGCTGCCCCTTCAGCAGAGAATGTGCGAAGCTCACCCGCCAGAGAAAGCTTTTCGGCTAAAAGGCTCAGATCATTGCCCATTCTTTTCAAAACCACAGGCACTCCACAAGCTCTTGGTAGAGATTGCAAATATTCCTCCTGCATCAAAGCCAAATCAGACCAGTTCTGGTGAGTAAAAATATCTGCTTCTGCATCCTTGTTAATTGCATCTTGCTTTAAAATGTAGATATGTAACGATATAATCCTCACCAAACACTTGTTTTGAGCTATTTGTTCATTTCATGTAGTTTATTTTTTTAATTTGAGAACTTATTGTATTATATGTGCATAATAATTCTATCAATATTGTATGTTGATGCTATATTTGGTTCAGTAATTTTTATCTGTGTTGACTCTTTTACACC

Network for GWHGAAEX011190

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12697.6	Abhydrolase_6	134	372	6.90E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	48.910
SRP064423	SRR2545915	Juvenile tuber	56.870
SRP108465	SRR5643513	five period of Gastrodia elata	56.290
	SRR5643514	five period of Gastrodia elata	55.610
	SRR5643515	five period of Gastrodia elata	60.110
	SRR5643524	five period of Gastrodia elata	60.450
	SRR5643525	five period of Gastrodia elata	61.760
	SRR5643528	five period of Gastrodia elata	66.020
	SRR5643658	five period of Gastrodia elata	67.220
	SRR5643659	five period of Gastrodia elata	50.810
	SRR5643660	five period of Gastrodia elata	59.180
	SRR5643661	five period of Gastrodia elata	53.580
	SRR5643662	five period of Gastrodia elata	59.130
	SRR5643663	five period of Gastrodia elata	52.890
	SRR5643664	five period of Gastrodia elata	66.680
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	52.860
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	54.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	55.680
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	57.560
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	52.560
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	59.700
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	49.550
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	57.830
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	54.170
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	45.530
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	60.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	60.130
SRP279888	Gastro	Gastrodia elata tuber	64.56
	Juven	Juvenile tuber	76.06
	Mother_Gastro	Mother tuber of Gastrodia elata	75.52
	Mother_Juven	Mother tuber of Juvenile	83.26