Detail information of GWHGAAEX011195/evm.TU.scaffold_36.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434387687|ref|YP_007098298.1|3.00E-07LPS:glycosyltransferase [Chamaesiphon minutus PCC 6605]
nrgi|672181631|ref|XP_008811042.1|0PREDICTED: probable galacturonosyltransferase 11 [Phoenix dactylifera]
Swissprottr|Q949Q1|GAUTB_ARATH0Probable galacturonosyltransferase 11
trEMBLtr|I1H4M2|I1H4M2_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G60010.1}
TAIRAT1G185800galacturonosyltransferase 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003621044872156483-
Transcript Sequence

Network for GWHGAAEX011195

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.19Glyco_transf_82364806.40E-62
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8

KEGG pathway

KO Enzyme pathway mapID
K13648GAUT Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0016757Molecular Functiontransferase activity, transferring glycosyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.390
SRR2545915Juvenile tuber8.270
SRP108465SRR5643513five period of Gastrodia elata13.750
SRR5643514five period of Gastrodia elata14.030
SRR5643515five period of Gastrodia elata15.050
SRR5643524five period of Gastrodia elata13.650
SRR5643525five period of Gastrodia elata29.910
SRR5643528five period of Gastrodia elata22.060
SRR5643658five period of Gastrodia elata26.250
SRR5643659five period of Gastrodia elata16.000
SRR5643660five period of Gastrodia elata15.820
SRR5643661five period of Gastrodia elata16.880
SRR5643662five period of Gastrodia elata16.610
SRR5643663five period of Gastrodia elata13.660
SRR5643664five period of Gastrodia elata17.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.090
SRR6049655Rhizomagastrodiae_C368-T10_good_114.720
SRR6049656Rhizomagastrodiae_C368-T07_good_112.600
SRR6049657Rhizomagastrodiae_C368-T07_good_113.620
SRR6049658Rhizomagastrodiae_C368-T04_good_111.470
SRR6049659Rhizomagastrodiae_C368-T04_good_113.540
SRR6049660Rhizomagastrodiae_C368-T01_good_112.240
SRR6049661Rhizomagastrodiae_C368-T04_good_112.310
SRR6049662Rhizomagastrodiae_C368-T01_good_112.670
SRR6049663Rhizomagastrodiae_C368-T01_good_110.910
SRR6049664Rhizomagastrodiae_C368-T10_good_114.710
SRR6049665Rhizomagastrodiae_C368-T10_good_114.710
SRP279888GastroGastrodia elata tuber 14.49
JuvenJuvenile tuber15.01
Mother_GastroMother tuber of Gastrodia elata 19.48
Mother_JuvenMother tuber of Juvenile 16.12