Detail information of GWHGAAEX011197/evm.TU.scaffold_36.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116619364|ref|YP_821520.1|3.00E-21serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
KOGKOG06000Cdc2-related protein kinase
nrgi|672127268|ref|XP_008787098.1|0PREDICTED: LOW QUALITY PROTEIN: probable serine/threonine-protein kinase At1g54610 [Phoenix dactylifera]
Swissprottr|F4I114|Y1960_ARATH7.00E-175Probable serine/threonine-protein kinase At1g09600
trEMBLtr|I1GSR8|I1GSR8_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G22690.1}
TAIRAT1G186700Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003622731972308780+
Transcript Sequence

Network for GWHGAAEX011197

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1113955.20E-69
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_CDK-CRK7-CDK9

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.930
SRR2545915Juvenile tuber2.540
SRP108465SRR5643513five period of Gastrodia elata1.570
SRR5643514five period of Gastrodia elata1.580
SRR5643515five period of Gastrodia elata1.440
SRR5643524five period of Gastrodia elata1.450
SRR5643525five period of Gastrodia elata2.160
SRR5643528five period of Gastrodia elata2.280
SRR5643658five period of Gastrodia elata1.950
SRR5643659five period of Gastrodia elata2.050
SRR5643660five period of Gastrodia elata2.120
SRR5643661five period of Gastrodia elata2.070
SRR5643662five period of Gastrodia elata2.600
SRR5643663five period of Gastrodia elata2.180
SRR5643664five period of Gastrodia elata1.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.030
SRR6049655Rhizomagastrodiae_C368-T10_good_10.770
SRR6049656Rhizomagastrodiae_C368-T07_good_11.490
SRR6049657Rhizomagastrodiae_C368-T07_good_11.530
SRR6049658Rhizomagastrodiae_C368-T04_good_10.680
SRR6049659Rhizomagastrodiae_C368-T04_good_10.780
SRR6049660Rhizomagastrodiae_C368-T01_good_10.850
SRR6049661Rhizomagastrodiae_C368-T04_good_11.250
SRR6049662Rhizomagastrodiae_C368-T01_good_10.940
SRR6049663Rhizomagastrodiae_C368-T01_good_10.810
SRR6049664Rhizomagastrodiae_C368-T10_good_11.170
SRR6049665Rhizomagastrodiae_C368-T10_good_11.170
SRP279888GastroGastrodia elata tuber 2.17
JuvenJuvenile tuber2.72
Mother_GastroMother tuber of Gastrodia elata 3.24
Mother_JuvenMother tuber of Juvenile 2.28