Detail information of GWHGAAEX011209/evm.TU.scaffold_36.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479131984|ref|YP_005071944.1|5.00E-22cyclic nucleotide-binding protein [Arthrospira platensis NIES-39]
KOGKOG04980K+-channel ERG and related proteins, contain PAS/PAC sensor domain
nrgi|672141186|ref|XP_008794413.1|0PREDICTED: probable cyclic nucleotide-gated ion channel 14 [Phoenix dactylifera]
Swissprottr|Q9SJA4|CNG14_ARATH0Probable cyclic nucleotide-gated ion channel 14
trEMBLtr|M0SBW3|M0SBW3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P04950_001}
TAIRAT2G246100cyclic nucleotide-gated channel 14

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003630988543129639+
Transcript Sequence

Network for GWHGAAEX011209

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00520.30Ion_trans824044.30E-21
PF00027.28cNMP_binding5005873.70E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05391CNGC Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006811Biological Procession transport
GO:0006813Biological Processpotassium ion transport
GO:0055085Biological Processtransmembrane transport
GO:0005216Molecular Functionion channel activity
GO:0005249Molecular Functionvoltage-gated potassium channel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.500
SRR2545915Juvenile tuber26.620
SRP108465SRR5643513five period of Gastrodia elata28.820
SRR5643514five period of Gastrodia elata24.540
SRR5643515five period of Gastrodia elata26.730
SRR5643524five period of Gastrodia elata25.040
SRR5643525five period of Gastrodia elata38.720
SRR5643528five period of Gastrodia elata36.040
SRR5643658five period of Gastrodia elata40.430
SRR5643659five period of Gastrodia elata32.440
SRR5643660five period of Gastrodia elata31.930
SRR5643661five period of Gastrodia elata35.600
SRR5643662five period of Gastrodia elata30.400
SRR5643663five period of Gastrodia elata31.140
SRR5643664five period of Gastrodia elata35.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.630
SRR6049655Rhizomagastrodiae_C368-T10_good_118.240
SRR6049656Rhizomagastrodiae_C368-T07_good_130.290
SRR6049657Rhizomagastrodiae_C368-T07_good_128.780
SRR6049658Rhizomagastrodiae_C368-T04_good_132.210
SRR6049659Rhizomagastrodiae_C368-T04_good_136.130
SRR6049660Rhizomagastrodiae_C368-T01_good_132.170
SRR6049661Rhizomagastrodiae_C368-T04_good_133.810
SRR6049662Rhizomagastrodiae_C368-T01_good_127.800
SRR6049663Rhizomagastrodiae_C368-T01_good_128.480
SRR6049664Rhizomagastrodiae_C368-T10_good_126.730
SRR6049665Rhizomagastrodiae_C368-T10_good_126.730
SRP279888GastroGastrodia elata tuber 38.71
JuvenJuvenile tuber38.75
Mother_GastroMother tuber of Gastrodia elata 55.26
Mother_JuvenMother tuber of Juvenile 37.32