Detail information of GWHGAAEX011211/evm.TU.scaffold_36.72
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|476413889|ref|YP_007543807.1| | 3.00E-12 | aldo/keto reductase [Glaciecola psychrophila 170] |
| KOG | KOG1576 | 4.00E-18 | Predicted oxidoreductase |
| nr | gi|695014909|ref|XP_009394298.1| | 9.84E-21 | PREDICTED: L-galactose dehydrogenase-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O81884|GALDH_ARATH | 1.00E-18 | L-galactose dehydrogenase |
| trEMBL | tr|M0SJ75|M0SJ75_MUSAM | 4.00E-21 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P30610_001} |
| TAIR | AT4G33670 | 4.00E-18 | NAD(P)-linked oxidoreductase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000036 | 3216207 | 3216637 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011211
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00248.20 | Aldo_ket_red | 24 | 63 | 7.50E-08 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K17744 | GalDH | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Ascorbate and aldarate metabolism | map00053 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.260 |
| SRR2545915 | Juvenile tuber | 13.540 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.500 |
| SRR5643514 | five period of Gastrodia elata | 29.840 | |
| SRR5643515 | five period of Gastrodia elata | 26.790 | |
| SRR5643524 | five period of Gastrodia elata | 27.460 | |
| SRR5643525 | five period of Gastrodia elata | 5.880 | |
| SRR5643528 | five period of Gastrodia elata | 5.160 | |
| SRR5643658 | five period of Gastrodia elata | 8.320 | |
| SRR5643659 | five period of Gastrodia elata | 9.390 | |
| SRR5643660 | five period of Gastrodia elata | 16.130 | |
| SRR5643661 | five period of Gastrodia elata | 11.700 | |
| SRR5643662 | five period of Gastrodia elata | 9.210 | |
| SRR5643663 | five period of Gastrodia elata | 6.830 | |
| SRR5643664 | five period of Gastrodia elata | 11.390 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 47.710 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 126.570 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 57.540 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 52.190 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 67.880 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 61.050 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 72.950 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 54.080 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 44.210 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 65.030 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 58.120 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 58.120 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 18.44 |
| Juven | Juvenile tuber | 44.51 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 29.03 | |
| Mother_Juven | Mother tuber of Juvenile | 36.51 |