Detail information of GWHGAAEX011212/evm.TU.scaffold_36.73
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|182413241|ref|YP_001818307.1| | 3.00E-75 | aldo/keto reductase [Opitutus terrae PB90-1] |
| KOG | KOG1576 | 2.00E-128 | Predicted oxidoreductase |
| nr | gi|695014909|ref|XP_009394298.1| | 5.83E-133 | PREDICTED: L-galactose dehydrogenase-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O81884|GALDH_ARATH | 6.00E-129 | L-galactose dehydrogenase |
| trEMBL | tr|M0SJ75|M0SJ75_MUSAM | 2.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P30610_001} |
| TAIR | AT4G33670 | 2.00E-128 | NAD(P)-linked oxidoreductase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000036 | 3216822 | 3243237 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011212
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00248.20 | Aldo_ket_red | 9 | 203 | 1.70E-30 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K17744 | GalDH | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Ascorbate and aldarate metabolism | map00053 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.880 |
| SRR2545915 | Juvenile tuber | 17.040 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 40.160 |
| SRR5643514 | five period of Gastrodia elata | 54.220 | |
| SRR5643515 | five period of Gastrodia elata | 42.270 | |
| SRR5643524 | five period of Gastrodia elata | 53.040 | |
| SRR5643525 | five period of Gastrodia elata | 9.280 | |
| SRR5643528 | five period of Gastrodia elata | 8.590 | |
| SRR5643658 | five period of Gastrodia elata | 11.500 | |
| SRR5643659 | five period of Gastrodia elata | 11.380 | |
| SRR5643660 | five period of Gastrodia elata | 22.230 | |
| SRR5643661 | five period of Gastrodia elata | 14.890 | |
| SRR5643662 | five period of Gastrodia elata | 12.720 | |
| SRR5643663 | five period of Gastrodia elata | 10.430 | |
| SRR5643664 | five period of Gastrodia elata | 12.430 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 56.760 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 39.870 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 65.590 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 63.250 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 55.100 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 54.670 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 58.860 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 54.350 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 57.180 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 63.150 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 60.730 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 60.730 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 31.01 |
| Juven | Juvenile tuber | 96.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 54.05 | |
| Mother_Juven | Mother tuber of Juvenile | 78.87 |