Gene detail

Detail information of GWHGAAEX011217/evm.TU.scaffold_36.80

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|337285527\|ref\|YP_004625000.1\|	1.00E-12	chaperone DnaJ domain-containing protein [Thermodesulfatator indicus DSM 15286]
KOG	KOG0717	2.00E-137	Molecular chaperone (DnaJ superfamily)
nr	gi\|672135291\|ref\|XP_008791313.1\|	3.50E-178	PREDICTED: dnaJ homolog subfamily C member 21 [Phoenix dactylifera]
Swissprot	tr\|Q0WTI8\|DNJ72_ARATH	8.00E-12	Chaperone protein dnaJ 72
trEMBL	tr\|A0A078HYL5\|A0A078HYL5_BRANA	1.00E-158	BnaC02g22840D protein {ECO:0000313\|EMBL:CDY42424.1}
TAIR	AT1G74250	2.00E-137	DNAJ heat shock N-terminal domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000036	3415379	3433562	-

Transcript Sequence
>GWHTAAEX011217 AGCAAACCAAACAGCTTATTAAGTTGAAGTTGGGCAAGGGAAGTAGCCACTCTATTCGATTATATTGTTGCATTCCTGCGTTCCCTGTTCTGGAAAGAGGGAGAGGAAGAATGGCCGAGCAACAGAAGCAGCGATGCCTCTACGATGTACTCGGAGTGAGTCGCGATTGTTCGCAGGAAGAGATTCGTTCTGCTTACAAGCGCCTTGCACTCCAGCTTCACCCCGACAAACTCGCCCGATCCAGTGCCGCCATTTCCGGCGACGCTACTGCCGCCTTCCAAGAACTCTTACATGCATACGAGGTCCTCTCCGATCCCAAAGAGAGGGCTTGGTATGACTCCCACCGCTCCCAGATTCTCTTCTCCGACCCTAACCCAGCCTCAAAAACGCGTTCCTCATCCCTCGACGTCGACCTTTTCTCTTTCTTCTCCAAGTCTGTCTTCTCTGGATATTCCGACTCTGGCAAGGGTTTCTTCAAGGTTTACGGTGACGTGTTTGCTAAAATTTACGCACAAGAGCTTAATTTTGCTGAGCAATTAGGGTTACCTTGTGATGCTGTCTCTCCTACACCTCTTATCGGAAATCTTGACAGCCCGTACACACAAGTTTCTGCCTTTTACAATTACTGGCTGGGGTTTTCAACCGTTATGAATTTTGCTTGGGTGGATGAATACGATTCTTTTGCTGGGCCTAATAGGAAGGCACGGAGGCTTATGGAGGAGGAAAACAAAAAGGTAAGAAAGAAGGCTAAGAGGGAGTACAATGAAACAGTACGTGGGCTCGCCGCTTTTGCGAAGAAGAGGGATAAGAGGGTTCTTGATATGCAGCTGAAGAAAAACGCCGAGGAGGACAAACGTCGGGCCGAAGAGAAGGAGTGGAAGAAAGAAGAAGAAAGGAAGAAGAAGGAGAGGGCAATGATGTATCAGGAGCCTGATTGGACAAAGAATGACTATGAAGTGAACAAAATGATTTGGGATGATGACAACTTTGATACAGGGAAGAAGAAGGGGAATGACAATGTTGATATGTACTGTGTAGTTTGTAATAAGAAGTTCAAGTCAGAGAAGCAATGGAAGAACCATGAGCAGTCCAAGAAGCACCGTGCAAAGGTTGCGGAGCTGAGGAGTACATTTGATGATGAAGATGAGGATTTGACGGGTGTCGGCCAGGAAGCATTTTGTGTGAGTTTTGACTATGAGCATCAGGATAATGAGAGTAGTGAGAGTGATACGGATCAGCTTTCAGAGACTCTTAGAGATGATTTAGCCTTGCAGGAAGAAGTAAAACATAATGGGCGTTTGAATATTGATGGTATGACTAGAAATGAACAGGTTGTTGAACCTTATAATGGTAATGGAATTGAGAATTCTAATGAATTGCATGATTTGAAAGGCCCTAAAAATGGTAGGGATCGTAGAGCAAAAAGGTGGGCCGGTATACAATCTGAGGTTAGGGATGCTAGTGGAGAGATTAGTTGGTCGCATAGGGATGACAGTGATGTTCATGAAAGTTGTACTGGCCATTCGGTGGATATTTTTTCTTCTGTTGAGGAGGTTTTAGAACAAAGTATAGGCGATCATGGTGTTGACAAGACTCAGAAGCTTAAAAAGCAACATTTACATGGGAAGTTACCTGAAAGGAAAGATACCATTTCACAAAAGAACTCTTTCAAAGGAAATAGGCAGAAGGCTGCAGCTAAGGCATCCAGTAATTCATGCGAAACTTGTGGGGAGAGCTTTGATTCAAGGAACAAATTATTTTCTCATCTGGGCAAGACTGGCCACGCTATGCTTAAATCATGATCAAATTAACAGATTCAAAGAAGGGAGATTGAAAAAATGGAGGGGTTTCTCATACTCTGTCCAGGCTCGCGTGAGCTGCTCGCTCATCAGAATTGTTTGAGCCAATAAGGTTGTTTCTGTTCATTTTTTTGGGAAAAGAACGATAATCTCACACTAGCAAGGACACGATTTTTGATCAGCGATTTTATAAAAAAAGGAAAGCATTGTTTGCCGTGTGGGTAAAAATATAGCCCACCTTTGGCTTCATGCCACTGCTTATCATATTGGCAAAGATATAAAATTTAGTTGTGTATTTTGAAAGCTGAATTTTTCTTTGAGCCCGTTTTGCTGATCTGTTTAGGTTGCTG

Network for GWHGAAEX011217

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	10	76	4.10E-21
PF12171.7	zf-C2H2_jaz	307	331	5.50E-10

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	C2H2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003676	Molecular Function	nucleic acid binding
GO:0008270	Molecular Function	zinc ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.250
SRP064423	SRR2545915	Juvenile tuber	12.750
SRP108465	SRR5643513	five period of Gastrodia elata	42.590
	SRR5643514	five period of Gastrodia elata	44.050
	SRR5643515	five period of Gastrodia elata	42.900
	SRR5643524	five period of Gastrodia elata	49.790
	SRR5643525	five period of Gastrodia elata	24.310
	SRR5643528	five period of Gastrodia elata	21.330
	SRR5643658	five period of Gastrodia elata	23.000
	SRR5643659	five period of Gastrodia elata	26.640
	SRR5643660	five period of Gastrodia elata	26.090
	SRR5643661	five period of Gastrodia elata	28.700
	SRR5643662	five period of Gastrodia elata	23.920
	SRR5643663	five period of Gastrodia elata	27.140
	SRR5643664	five period of Gastrodia elata	22.650
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	33.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	34.740
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	30.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.520
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	26.410
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	29.610
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.330
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.630
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	25.750
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	27.410
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.480
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.480
SRP279888	Gastro	Gastrodia elata tuber	16.23
	Juven	Juvenile tuber	52.92
	Mother_Gastro	Mother tuber of Gastrodia elata	23.35
	Mother_Juven	Mother tuber of Juvenile	36.17