Gene detail

Detail information of GWHGAAEX011218/evm.TU.scaffold_36.81

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|573963839\|ref\|XP_006664046.1\|	PREDICTED: ureide permease 2-like [Oryza brachyantha]
Swissprot	tr\|Q9ZQ89\|UPS2_ARATH	Ureide permease 2
trEMBL	tr\|J3NDL8\|J3NDL8_ORYBR	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB12G20760.1}
TAIR	AT2G03590	ureide permease 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000036	3519280	3550602	+

Transcript Sequence
>GWHTAAEX011218 ACGTTTTTATTGCTAGATTTCTGCTGATTTGTCAGGTTGCATATTGCCTGTGCTTGTGTCGAACTCTGCCCGCAGTTCTCTGTGGTCGGGTCTCTGCCATGGCCAAAGATTTCTATATCTCGGATTCATTCTATTATTGCGTTTTTACCTTTTTTGCAGGCCAAAGCTTTCTTTGTTTTTTGCCGATCGAGTCAACGGATTTAATTTGTGGTTGTTTTCAATTGTTAATATTGGCAAATTAGCTTAGTTTTTTATTGAGCTAAATTAATGGCCTCTTGCCGCCTTTGTGGACATGTGGGCTTTTCCGTTTTATATAAAGGGGGCTGCTGAACCTTTTCTTCCTGGCGTCAAACTTCAAACTCTTTGAATCATTCACATTTATTTTTTATGCTGATTTTCGCTGTTTCTTTGAACTAGCGATTTGTCTCAAATCATCAACGTGGCCCTCTTTCTTTTCAATTTATTAATGCTACTGGGCTTTGAAGTGTTCTTTTTAGTATGTGTGATTTTCTTTGGCAGTATTCCATTTCGAGACTTAAATTAAAGTTTATGAATTGCCGCTCAACCTATTGTCTGGCAGAATATTGAAAGATGTATGTGATCGAAGATAAAGGAGGGGCAATTGCTCTGATGATTGCTGCCCTGATATTTTTGGGCACTTGGCCTGCTATTTTAACCCTTCTTGAGAGAAGGGGTCGTCTTCCTCAACATACATATCTTGATTACTCCATTACAAATCTGATGGCTGCCGTCCTAATTGCTCTCACCTTTGGTCAAATCGGAGATAGCAAACCTAATCAGCCCAATTTCTTCACTCAGCTTTCCCAGGATAACTGGCCTTCAGTGCTGTTTGCAATGGCGGGTGGGGTTGTCTTGAGTCTTGGGAATCTATCAACACAATATGCATGGGCCTATGTTGGCCTTTCAGCAACTGAAGTAATAACCTGTAGCATTACAGTTGTAGTAGGAACAACAATGAATTATTTCTTAGATGGTCGAATCAATAATGCTGATATTTTGTTCCCTGGAGTTGGATGCTTCTTGGTTGCCATTTTTCTTGGATCTGCTGTCCATTCTTCCAATGCAGCTGATAATAAAGAGAAATTAAAGGGCTCCTCTAGTATCAAACATGGCAGCACTTGTGACTTGGGAGAATATAAGAATGGAAGCAATGAACCCATGAAAGATGCTGGAAAGGATGTAGAGATTGGATCTCTCAATGCATCGAACTCCAAGGCGGAGAAATCAAAAGCTGGCACAGTCGAATACCTCTTAAAACTTGAAGAACAGAGATCAATCAAGGTTGTCGGTTCAAGCATGTTTCTGGGCCTTGCAATTGTGTTTTTTGCTGGCATTTGCTTCTCTCTTTTCTCTCCAGCATTCAACTTGGCCACAAATGACCAATGGCACGTCCTTAAGAAGGGAGTGCCCCATCTTGTGGTTTATACAGCATTTTTCTATTTCTCCTTGTCCTGTTTTGTTCTCGCAATTGCTTTAAACATTCGGTTTCTTTACTTTCCCATTCTTGGACTACCAAAATCATCTTTTAAAGCTTACATCAACGACTGGAATGGGAGACAATGGGCTCTTTTGGCAGGCCTCCTTTGTGGATTTGGGAATGGCTTTCAGTTCATGGGTGGGCAAGCTGCTGGATATGCTGCAGCAGATGCTGTTCAGGCTCTGCCGCTTGTCAGCACTTTCTGGGGAGTAGCTTTTTTGGGCGAGTACCGAAAATCATCAAAGAAAACCTACATTTTACTGATAAGCATGCTTGCTATGTTTATCGTAGCCGTTGCTGTTCTAATGGCTTCATCAGGGCATAGAAAGTCTAATTGATGTCCCATCACTTCTCTCCACTCTTTTGGTGCAACAACAATTAAATATAATATGTTTCTCTCATATGTTTTGTAGTGAAGTACTGAAGTATATATACGTTACTCTTTTGCTGCTGAAAGTTCAGTGATACTACTTTTGGAGACTGCCGCCTATTTGTAAGGCTATTCTTTTGTTGGAGGTACAGTTAGTATTTCCCAACTGCTGTGTAATTTTTTTTTCCCAAGGGTTTTGCTAGTGTAAGATATTTGTATTGTTCTTGTGTGCTATTCTGCAAAGAGATAACTTGCATCTTGAGGAGACTAACATATGGGCCGGCTCAATAAAATGGATGGAAAATGATCATTCTTTAAAACTAGGTTTGATCTGGTTTAACAACAACAATATGCACCTTCACCAACATGCAAGCAGTGAAAGTTTGATCAGATTGAAGAATGAAATCTAAATTGGCTTGTTAAGAGATCTAATGTCTGGGTTAATATTTGGTGTCCATTTGAGCAACCTCATAGGACACCACATGGATAATTGGTTGTGAGAAGATTCAACATAGAAGCATTAGATAACTTCAGAAAGGCGTGTTTCTTCTCAGTGCTAGAGAAACTATATAGCGATAAAGCCTTATGAATAGAAACCATCGTCGGGCGTCCGTGGGGGAATTTAGCAACAAAGTAGATTTCAAACAGTTGCTACTGTGTAAAAATCTCTTATGAGAAGTAGAGTTGGTTTTCCATTGCACTTGGTAAAAAGCTCAATGGAAGTTTGAGCTATGGCAAACTATTAAAAGCTCGAAACAAAATGTGCAGAGGATCTATTCGTCTAAATTGATTGTGATGCACAAGAGCTGGATCAGATGACTAAAGGATTCAGAGGAAGGCACATTGGAGAGTGATCAATCAATGGTGAGAGCAGATGGAAAATAGGGATACCCATCCAAAGCCAAAATCGATGTGATGGCGGCTAGGTCCCCCTCAGAAGCCAACGAAAGGATACACCCAGATCCAGTCGACTCTAGGACATTAGCCGAAAAAGGAGCATCTAGAAAAGAGTCATCCCGATCACTTATTGCAGCTAAAGAGGCAAAGTCACATGGTGAAGATGCATTCGATGCAACCATTGGTAGATTCGAAGTTGATAGAGCGTTCATTGAAGGCAGTTGCAACCCCTATATCATACATGGTGCCTTCGCATAGCTAGATGCTATGATCGGCGAGATTGCGTCAATGGAGAGGTCCGATGGTGGATTCGACTAAGATTGCACACCCAAAGGGAGATCTGATTGAGAACATATTAAGCTTGATTTTTGTATGTTGAACACACATATTAAGTATATTGAGAGTGAAGTATGTTGAAGTTCTCTCCCCTAAAGTGTGTAAAAAAGAGCTTGATCCTTGTATATTGAACTTTGTGTTCAATCATATTTAGCTTGATATTTGATCACTGATGATACACTCACC

Network for GWHGAAEX011218

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module14

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07168.10	Ureide_permease	41	407	2.00E-192

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071705	Biological Process	nitrogen compound transport

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.740
SRP064423	SRR2545915	Juvenile tuber	8.600
SRP108465	SRR5643513	five period of Gastrodia elata	10.940
	SRR5643514	five period of Gastrodia elata	14.200
	SRR5643515	five period of Gastrodia elata	19.860
	SRR5643524	five period of Gastrodia elata	20.100
	SRR5643525	five period of Gastrodia elata	13.710
	SRR5643528	five period of Gastrodia elata	19.040
	SRR5643658	five period of Gastrodia elata	10.690
	SRR5643659	five period of Gastrodia elata	14.590
	SRR5643660	five period of Gastrodia elata	16.440
	SRR5643661	five period of Gastrodia elata	15.940
	SRR5643662	five period of Gastrodia elata	11.030
	SRR5643663	five period of Gastrodia elata	10.410
	SRR5643664	five period of Gastrodia elata	7.740
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.340
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.780
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.370
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	25.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	27.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.700
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.750
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	17.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	22.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.260
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.260
SRP279888	Gastro	Gastrodia elata tuber	13.29
	Juven	Juvenile tuber	5.51
	Mother_Gastro	Mother tuber of Gastrodia elata	43.58
	Mother_Juven	Mother tuber of Juvenile	15.29