Detail information of GWHGAAEX011226/evm.TU.scaffold_36.92


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13792.00E-128Serine/threonine protein phosphatase
nrgi|672125402|ref|XP_008786118.1|3.61E-167PREDICTED: probable protein phosphatase 2C 55 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9SUK9|P2C55_ARATH3.00E-127Probable protein phosphatase 2C 55
trEMBLtr|M0TYT0|M0TYT0_MUSAM6.00E-167Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P09210_001}
TAIRAT4G165802.00E-128Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003641058624128937+
Transcript Sequence

Network for GWHGAAEX011226

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07228.11SpoIIE2224329.30E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.470
SRR2545915Juvenile tuber32.600
SRP108465SRR5643513five period of Gastrodia elata21.390
SRR5643514five period of Gastrodia elata22.290
SRR5643515five period of Gastrodia elata18.240
SRR5643524five period of Gastrodia elata18.590
SRR5643525five period of Gastrodia elata20.430
SRR5643528five period of Gastrodia elata16.080
SRR5643658five period of Gastrodia elata24.240
SRR5643659five period of Gastrodia elata21.790
SRR5643660five period of Gastrodia elata23.200
SRR5643661five period of Gastrodia elata18.580
SRR5643662five period of Gastrodia elata24.640
SRR5643663five period of Gastrodia elata22.870
SRR5643664five period of Gastrodia elata22.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.200
SRR6049655Rhizomagastrodiae_C368-T10_good_122.570
SRR6049656Rhizomagastrodiae_C368-T07_good_125.030
SRR6049657Rhizomagastrodiae_C368-T07_good_135.970
SRR6049658Rhizomagastrodiae_C368-T04_good_128.370
SRR6049659Rhizomagastrodiae_C368-T04_good_136.220
SRR6049660Rhizomagastrodiae_C368-T01_good_134.720
SRR6049661Rhizomagastrodiae_C368-T04_good_128.680
SRR6049662Rhizomagastrodiae_C368-T01_good_123.760
SRR6049663Rhizomagastrodiae_C368-T01_good_125.140
SRR6049664Rhizomagastrodiae_C368-T10_good_122.470
SRR6049665Rhizomagastrodiae_C368-T10_good_122.470
SRP279888GastroGastrodia elata tuber 18.42
JuvenJuvenile tuber28.77
Mother_GastroMother tuber of Gastrodia elata 12.52
Mother_JuvenMother tuber of Juvenile 14.28