Detail information of GWHGAAEX011228/evm.TU.scaffold_36.94
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0156 | 5.00E-19 | Cytochrome P450 CYP2 subfamily |
| nr | gi|658023241|ref|XP_008347028.1| | 2.57E-21 | PREDICTED: cytochrome P450 CYP736A12-like [Malus domestica] |
| Swissprot | tr|O65784|C71B5_ARATH | 2.00E-19 | Cytochrome P450 71B5 |
| trEMBL | tr|I3VI25|I3VI25_BUPCH | 5.00E-21 | Cytochrome P450 CYP736A54 {ECO:0000313|EMBL:AFK79031.1} |
| TAIR | AT3G53280 | 5.00E-19 | cytochrome p450 71b5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000036 | 4282930 | 4283259 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011228
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 31 | 107 | 1.70E-05 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.630 |
| SRR2545915 | Juvenile tuber | 9.950 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.430 |
| SRR5643514 | five period of Gastrodia elata | 3.060 | |
| SRR5643515 | five period of Gastrodia elata | 2.390 | |
| SRR5643524 | five period of Gastrodia elata | 2.510 | |
| SRR5643525 | five period of Gastrodia elata | 2.780 | |
| SRR5643528 | five period of Gastrodia elata | 3.370 | |
| SRR5643658 | five period of Gastrodia elata | 0.510 | |
| SRR5643659 | five period of Gastrodia elata | 12.650 | |
| SRR5643660 | five period of Gastrodia elata | 16.750 | |
| SRR5643661 | five period of Gastrodia elata | 6.290 | |
| SRR5643662 | five period of Gastrodia elata | 8.550 | |
| SRR5643663 | five period of Gastrodia elata | 11.790 | |
| SRR5643664 | five period of Gastrodia elata | 10.750 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.330 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 20.690 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.460 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 15.730 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.720 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 12.250 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.520 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.970 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.900 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.680 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.60 |
| Juven | Juvenile tuber | 7.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.15 | |
| Mother_Juven | Mother tuber of Juvenile | 1.99 |