Detail information of GWHGAAEX011230/evm.TU.scaffold_36.96
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0156 | 1.00E-12 | Cytochrome P450 CYP2 subfamily |
| nr | gi|661877099|emb|CDP19009.1| | 1.86E-14 | unnamed protein product [Coffea canephora] |
| Swissprot | tr|Q9SD85|F3PH_ARATH | 4.00E-13 | Flavonoid 3'-monooxygenase |
| trEMBL | tr|A0A068VEL2|A0A068VEL2_COFCA | 7.00E-15 | Coffea canephora |
| TAIR | AT5G07990 | 1.00E-12 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000036 | 4295424 | 4296151 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011230
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05280 | CYP75B1 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Flavonoid biosynthesis | map00941 | ||
| Flavone and flavonol biosynthesis | map00944 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 43.200 |
| SRR2545915 | Juvenile tuber | 31.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.330 |
| SRR5643514 | five period of Gastrodia elata | 11.140 | |
| SRR5643515 | five period of Gastrodia elata | 10.620 | |
| SRR5643524 | five period of Gastrodia elata | 0.000 | |
| SRR5643525 | five period of Gastrodia elata | 55.170 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 5.380 | |
| SRR5643659 | five period of Gastrodia elata | 17.280 | |
| SRR5643660 | five period of Gastrodia elata | 5.690 | |
| SRR5643661 | five period of Gastrodia elata | 10.180 | |
| SRR5643662 | five period of Gastrodia elata | 6.810 | |
| SRR5643663 | five period of Gastrodia elata | 7.900 | |
| SRR5643664 | five period of Gastrodia elata | 26.380 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 26.280 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 75.640 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.880 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 53.610 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 33.720 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.870 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 40.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.060 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.060 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 90.58 |
| Juven | Juvenile tuber | 117.27 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 50.24 |