Detail information of GWHGAAEX011233/evm.TU.scaffold_36.99
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|434391665|ref|YP_007126612.1| | 6.00E-31 | Unspecific monooxygenase [Gloeocapsa sp. PCC 7428] |
| KOG | KOG0156 | 1.00E-157 | Cytochrome P450 CYP2 subfamily |
| nr | gi|478686569|gb|AGJ50589.1| | 8.95E-169 | flavonoid 3'-hydroxylase [Tulipa fosteriana] |
| Swissprot | tr|Q9SD85|F3PH_ARATH | 4.00E-158 | Flavonoid 3'-monooxygenase |
| trEMBL | tr|M9TH21|M9TH21_9LILI | 3.00E-169 | Flavonoid 3'-hydroxylase {ECO:0000313|EMBL:AGJ50589.1} |
| TAIR | AT5G07990 | 1.00E-157 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000036 | 4353659 | 4366141 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011233
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 33 | 471 | 8.10E-94 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP75B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05280 | CYP75B1 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Flavonoid biosynthesis | map00941 | ||
| Flavone and flavonol biosynthesis | map00944 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.380 |
| SRR2545915 | Juvenile tuber | 0.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.460 |
| SRR5643514 | five period of Gastrodia elata | 2.710 | |
| SRR5643515 | five period of Gastrodia elata | 3.250 | |
| SRR5643524 | five period of Gastrodia elata | 2.770 | |
| SRR5643525 | five period of Gastrodia elata | 16.000 | |
| SRR5643528 | five period of Gastrodia elata | 26.180 | |
| SRR5643658 | five period of Gastrodia elata | 17.350 | |
| SRR5643659 | five period of Gastrodia elata | 2.010 | |
| SRR5643660 | five period of Gastrodia elata | 1.430 | |
| SRR5643661 | five period of Gastrodia elata | 2.680 | |
| SRR5643662 | five period of Gastrodia elata | 4.290 | |
| SRR5643663 | five period of Gastrodia elata | 3.840 | |
| SRR5643664 | five period of Gastrodia elata | 2.790 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.620 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.980 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.870 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.210 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.140 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 6.460 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.060 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.040 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.520 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.130 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.130 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.17 |
| Juven | Juvenile tuber | 0.72 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 99.05 | |
| Mother_Juven | Mother tuber of Juvenile | 83.56 |