Detail information of GWHGAAEX011239/evm.TU.scaffold_36.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743837236|ref|XP_010936340.1|0PREDICTED: uncharacterized protein LOC105055988 [Elaeis guineensis]
trEMBLtr|I1QGP6|I1QGP6_ORYGL0Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA08G0059700.1}
TAIRAT2G155602.00E-130Putative endonuclease or glycosyl hydrolase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003646488024650367+
Transcript Sequence

Network for GWHGAAEX011239

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01936.17NYN481895.90E-28
PF12872.6OST-HTH3143781.70E-07
PF12872.6OST-HTH4445066.10E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.440
SRR2545915Juvenile tuber36.920
SRP108465SRR5643513five period of Gastrodia elata17.930
SRR5643514five period of Gastrodia elata16.150
SRR5643515five period of Gastrodia elata19.870
SRR5643524five period of Gastrodia elata14.910
SRR5643525five period of Gastrodia elata19.490
SRR5643528five period of Gastrodia elata18.350
SRR5643658five period of Gastrodia elata20.310
SRR5643659five period of Gastrodia elata22.550
SRR5643660five period of Gastrodia elata25.340
SRR5643661five period of Gastrodia elata23.440
SRR5643662five period of Gastrodia elata28.750
SRR5643663five period of Gastrodia elata27.780
SRR5643664five period of Gastrodia elata31.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.650
SRR6049655Rhizomagastrodiae_C368-T10_good_112.370
SRR6049656Rhizomagastrodiae_C368-T07_good_115.000
SRR6049657Rhizomagastrodiae_C368-T07_good_113.310
SRR6049658Rhizomagastrodiae_C368-T04_good_114.440
SRR6049659Rhizomagastrodiae_C368-T04_good_114.160
SRR6049660Rhizomagastrodiae_C368-T01_good_115.500
SRR6049661Rhizomagastrodiae_C368-T04_good_116.170
SRR6049662Rhizomagastrodiae_C368-T01_good_116.700
SRR6049663Rhizomagastrodiae_C368-T01_good_114.810
SRR6049664Rhizomagastrodiae_C368-T10_good_117.020
SRR6049665Rhizomagastrodiae_C368-T10_good_117.020
SRP279888GastroGastrodia elata tuber 32.00
JuvenJuvenile tuber28.57
Mother_GastroMother tuber of Gastrodia elata 26.82
Mother_JuvenMother tuber of Juvenile 28.87