Detail information of GWHGAAEX011252/evm.TU.scaffold_36.128


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33856.00E-58V-SNARE
nrgi|743853192|ref|XP_010940593.1|4.06E-71PREDICTED: bet1-like SNARE 1-1 [Elaeis guineensis]
Swissprottr|Q9M2J9|BET11_ARATH2.00E-58Bet1-like SNARE 1-1
trEMBLtr|U5CP95|U5CP95_AMBTC2.00E-70Uncharacterized protein {ECO:0000313|EMBL:ERN14986.1}
TAIRAT3G581706.00E-58BET1P/SFT1P-like protein 14A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003657763395796509-
Transcript Sequence

Network for GWHGAAEX011252

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08504BET1 SNARE interactions in vesicular transport map04130

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms169.530
SRR2545915Juvenile tuber153.430
SRP108465SRR5643513five period of Gastrodia elata21.650
SRR5643514five period of Gastrodia elata19.610
SRR5643515five period of Gastrodia elata23.640
SRR5643524five period of Gastrodia elata21.090
SRR5643525five period of Gastrodia elata16.310
SRR5643528five period of Gastrodia elata25.470
SRR5643658five period of Gastrodia elata20.740
SRR5643659five period of Gastrodia elata67.130
SRR5643660five period of Gastrodia elata78.620
SRR5643661five period of Gastrodia elata20.740
SRR5643662five period of Gastrodia elata88.420
SRR5643663five period of Gastrodia elata76.830
SRR5643664five period of Gastrodia elata105.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.830
SRR6049655Rhizomagastrodiae_C368-T10_good_132.040
SRR6049656Rhizomagastrodiae_C368-T07_good_135.910
SRR6049657Rhizomagastrodiae_C368-T07_good_151.230
SRR6049658Rhizomagastrodiae_C368-T04_good_164.430
SRR6049659Rhizomagastrodiae_C368-T04_good_178.220
SRR6049660Rhizomagastrodiae_C368-T01_good_147.200
SRR6049661Rhizomagastrodiae_C368-T04_good_150.720
SRR6049662Rhizomagastrodiae_C368-T01_good_137.090
SRR6049663Rhizomagastrodiae_C368-T01_good_145.530
SRR6049664Rhizomagastrodiae_C368-T10_good_129.480
SRR6049665Rhizomagastrodiae_C368-T10_good_129.480
SRP279888GastroGastrodia elata tuber 28.73
JuvenJuvenile tuber28.67
Mother_GastroMother tuber of Gastrodia elata 23.29
Mother_JuvenMother tuber of Juvenile 29.70