Detail information of GWHGAAEX011257/evm.TU.scaffold_360.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428313749|ref|YP_007124726.1|0dihydrolipoamide dehydrogenase [Microcoleus sp. PCC 7113]
KOGKOG13350Dihydrolipoamide dehydrogenase
nrgi|743768552|ref|XP_010914552.1|0PREDICTED: dihydrolipoyl dehydrogenase 2, chloroplastic [Elaeis guineensis]
Swissprottr|A8MS68|PLPD1_ARATH0Dihydrolipoyl dehydrogenase 1, chloroplastic (Precursor)
trEMBLtr|M0SE33|M0SE33_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P12660_001}
TAIRAT3G169500lipoamide dehydrogenase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000003602867984179-
Transcript Sequence

Network for GWHGAAEX011257

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.13Pyr_redox_2854202.40E-61
PF02852.21Pyr_redox_dim4395505.40E-30
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00382DLD, lpd, pdhD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630
Propanoate metabolismmap00640
Pyrimidine metabolismmap00240
Cysteine and methionine metabolismmap00270
Lysine degradationmap00310
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0055114Biological Processoxidation-reduction process
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0016668Molecular Functionoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
GO:0009055Molecular Functionelectron carrier activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms63.620
SRR2545915Juvenile tuber88.520
SRP108465SRR5643513five period of Gastrodia elata99.400
SRR5643514five period of Gastrodia elata131.090
SRR5643515five period of Gastrodia elata107.440
SRR5643524five period of Gastrodia elata121.450
SRR5643525five period of Gastrodia elata41.660
SRR5643528five period of Gastrodia elata47.450
SRR5643658five period of Gastrodia elata42.770
SRR5643659five period of Gastrodia elata68.480
SRR5643660five period of Gastrodia elata68.560
SRR5643661five period of Gastrodia elata68.460
SRR5643662five period of Gastrodia elata92.650
SRR5643663five period of Gastrodia elata93.350
SRR5643664five period of Gastrodia elata90.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1112.090
SRR6049655Rhizomagastrodiae_C368-T10_good_187.260
SRR6049656Rhizomagastrodiae_C368-T07_good_1110.940
SRR6049657Rhizomagastrodiae_C368-T07_good_1104.180
SRR6049658Rhizomagastrodiae_C368-T04_good_195.200
SRR6049659Rhizomagastrodiae_C368-T04_good_189.580
SRR6049660Rhizomagastrodiae_C368-T01_good_198.230
SRR6049661Rhizomagastrodiae_C368-T04_good_1100.180
SRR6049662Rhizomagastrodiae_C368-T01_good_1121.160
SRR6049663Rhizomagastrodiae_C368-T01_good_1103.180
SRR6049664Rhizomagastrodiae_C368-T10_good_1123.280
SRR6049665Rhizomagastrodiae_C368-T10_good_1123.280
SRP279888GastroGastrodia elata tuber 86.53
JuvenJuvenile tuber100.30
Mother_GastroMother tuber of Gastrodia elata 46.96
Mother_JuvenMother tuber of Juvenile 81.93