Detail information of GWHGAAEX011259/evm.TU.scaffold_361.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83309302|ref|YP_419566.1|3.00E-168chaperonin GroEL [Magnetospirillum magneticum AMB-1]
KOGKOG03560Mitochondrial chaperonin, Cpn60/Hsp60p
nrgi|743797552|ref|XP_010925013.1|0PREDICTED: chaperonin CPN60-like 2, mitochondrial isoform X1 [Elaeis guineensis]
Swissprottr|Q93ZM7|CH60C_ARATH0Chaperonin CPN60-like 2, mitochondrial (Precursor)
trEMBLtr|M0TK95|M0TK95_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P24090_001}
TAIRAT3G138600heat shock protein 60-3A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000354434530633+
Transcript Sequence

Network for GWHGAAEX011259

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00118.23Cpn60_TCP1164533.10E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04077groEL, HSPD1 RNA degradation map03018
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0042026Biological Processprotein refolding
GO:0006457Biological Processprotein folding
GO:0005524Molecular FunctionATP binding
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.220
SRR2545915Juvenile tuber18.590
SRP108465SRR5643513five period of Gastrodia elata13.530
SRR5643514five period of Gastrodia elata14.640
SRR5643515five period of Gastrodia elata12.950
SRR5643524five period of Gastrodia elata13.410
SRR5643525five period of Gastrodia elata1.400
SRR5643528five period of Gastrodia elata0.730
SRR5643658five period of Gastrodia elata1.140
SRR5643659five period of Gastrodia elata11.790
SRR5643660five period of Gastrodia elata11.260
SRR5643661five period of Gastrodia elata13.350
SRR5643662five period of Gastrodia elata12.780
SRR5643663five period of Gastrodia elata13.080
SRR5643664five period of Gastrodia elata10.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.780
SRR6049655Rhizomagastrodiae_C368-T10_good_19.900
SRR6049656Rhizomagastrodiae_C368-T07_good_116.620
SRR6049657Rhizomagastrodiae_C368-T07_good_115.730
SRR6049658Rhizomagastrodiae_C368-T04_good_113.150
SRR6049659Rhizomagastrodiae_C368-T04_good_114.340
SRR6049660Rhizomagastrodiae_C368-T01_good_116.100
SRR6049661Rhizomagastrodiae_C368-T04_good_117.520
SRR6049662Rhizomagastrodiae_C368-T01_good_129.320
SRR6049663Rhizomagastrodiae_C368-T01_good_121.080
SRR6049664Rhizomagastrodiae_C368-T10_good_115.750
SRR6049665Rhizomagastrodiae_C368-T10_good_115.750
SRP279888GastroGastrodia elata tuber 20.80
JuvenJuvenile tuber22.60
Mother_GastroMother tuber of Gastrodia elata 5.39
Mother_JuvenMother tuber of Juvenile 8.49