Gene detail

Detail information of GWHGAAEX011260/evm.TU.scaffold_361.2

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672190316\|ref\|XP_008775217.1\|	3.20E-36	PREDICTED: uncharacterized protein LOC103695626, partial [Phoenix dactylifera]
trEMBL	tr\|I1I9Z0\|I1I9Z0_BRADI	3.00E-28	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI3G44217.1}
TAIR	AT5G03780	2.00E-10	TRF-like 10

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000354	31157	42187	-

Transcript Sequence
>GWHTAAEX011260 TCGGCGATGCATCGAGCCTGGGAAAGTCTTGCTTGCTCAGCGCACCACCGAGAATGGAGCTGAGTTTACGGACTAAATGTTGAAACCCTAATTGCTTCTCTCAGATCCTCCATGTCATCTTCGATACTCGCATGGCGGTGGGTGATTGAATCCCTAGCCGCCATCCCCGATGTAGGAACCTCCATCCTCAGCGCTTTAGTCGACAAGTTTCCAGACGTGCTCGCCGATTCTTCCGGCGCTGTAAGAGAGAGGCTCGCTTTGAGATATGTTGAGGAGTGTTCGGGCATGGCTTGCGGGGAGATTCCCCCGGTTGTAGCCGCCAACGCTTCTTCACCTTTGAAGATTGATGCATCCAAAACATGCGAAGAGGTTCTGCTGTCAAAAATGACAACATCAAATGACATTGCTAAGGGAAAAACTGATCTTGATGGCGCTGACCTTCACCATTTTGTTCTCCTAAAGAAAGCAGCACTTCCAAAATCTTCTATTGATCTGCTGAAGGAAAAAATTCTAGGAAGCTATCATCCTGAGTCCTCCCATTCGAAGGAAATCAACAATTTGCCCGATTTGCCCAAAGTGTCGAGACCCTGTCTTGCAAATACTTTCACTTCTAACAATCATAGAGATCATGATGACATTAGAAAACTCATAAGAAACTTAAAGTATGCAAACCCATGGTTGAAGAAATTTACTGTGACTAGAAGATACAGAAGACTAAAAAAACTGGATAGCACACCCTCAAAAAGCATAGGTGGAAGAGTATCACAAAATATTTCTAGCTCTCAGAAGCATTTGGAAGAGCAAAATGCATCCTTCGGGGAAAAGAGAAACCAGCAAACTAATGTTGATGTTGGTACATGCAATGTTGATGATGGTAGCACACCCTTGAAAAGCATAGATGGAAGAGTATCACAAAATATTTCTAGTTCTTGGAAGCATTTGGAAGAGCAAAATGCATCCTTCATGGAAAAGAGAGACCAGCAAACTAATGTTGATGATGGTACATGCAATGTTGATTTCATTAAACCTGCAAAGATTAATGCAAGTACATTTGAAGAAGAGTCAGCTGAGTTCCATGAAGTTAATTTACCAGGCTATGCTCAAGCTCCAAATGGCCCCTCAGAAAATTTCATAGAGCTGCTCGCTCAATTTGGAGAACAATCTGAAAATCCTCAAAATATTATACATGATAGATGTGAATTTGGGCAACAATCTCCTAAGCAGCAAAATATTCGACATGACAATAGTGCTAATTCCCAGAAAGCCAGCAGCGACTGTGGTGATGTGCCGTTGTTGAAGCAGAACTCCACACATCAATCATCGCATGCCCAAAACTCGTGCATAGTATGCCACCGAAGTGGTTCTCTTTTGGACTGCCTTGGCAATGGCTGTTCGAGGTCTATTCATGAGAGCTGCTCAGGTTTACTGAGCACAGTTGTGAAGAATGGCCGATTCTATTGCCCATTGTGCTATTATAAAAAGGCACAACTGTCGTATACGAAGGCAAAAAGAAGACTTGAGAAAGCTCGGAGAAACATTTTCTTATATTCTGATAACTGTCCGGCTTGCGCACCTAGAAAGGGCTGTGCCCATCACAACCAGTGTACCCATCCAGATTTGCATTCTGATAAAAAAAATTTCTGCCGAAGCGCTGGTGAGAAAAAATACTATGAAACTCAAAATGCAGAAACAAGAAGCAAGAGTGACCCTGGAGTCGCTCAAAATCAGCAAGATGATGTATCCTATAAGATTATATTGCCTAGAAAAAAAACTATCGAGTGTGACACTGGGCAAGTTTGTCAAGTTACCCCGATAAGAGGGCAAAAGAGTTGTAGGGTGACAGAGTATCAACAGCCTGTGGTTTTACGTGCATCCCCTGAGAGAAATAATATTGATGCTTCTGTTATAAACAGTAGAAATGAAGTTTGCATGGATCACTTGCAAGTTGGAGAGATTCAAAATTTGCATACTGGAGATAACGATCGGGAAAAGCAAAATCTTCTTTCTAGAGAATGTGATTATAATGCCAAACGAAAGGCTTTGGCTTCGCAGATCGGTGACAGGTTTTGCCATCCAAGCAGAAGAGATGGTAAAACTATTAAGACTGATAATTATCAGATGGCTATCACGAATCAGCAAACCGATAATTTATCTTCAAGAGAGTTGAGGACGAGCACACACCGGCAGCAGAATCTTCAAAGTATAAATCCGAAAGGGCCATCATCTATCAGGAGGACAATGTTAATTTGGAAGCCAGAGGAAGAACAAGCGTTAGAGGAGGCGATGCTGAAAATCCCTAGAAATATTGATGGGAGCATACCATGGATAAAGATCTTGGAATATACCCGACCTGTTCTTCATGAATCCCGTACCCCAATTGACCTTAAAGATAAATGGAGAAACATGCAGAAGAAGGTGAAGAAGAGACGGAGGAGGGATTGAAATTTTGAAATGTTTCTTTTTTGTATAGTTCTTAACTTTCTAACTCTGTTAGTATTAATATATATATATATATATA

Network for GWHGAAEX011260

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	19.000
SRP064423	SRR2545915	Juvenile tuber	14.090
SRP108465	SRR5643513	five period of Gastrodia elata	9.240
	SRR5643514	five period of Gastrodia elata	9.620
	SRR5643515	five period of Gastrodia elata	10.780
	SRR5643524	five period of Gastrodia elata	9.460
	SRR5643525	five period of Gastrodia elata	11.140
	SRR5643528	five period of Gastrodia elata	12.730
	SRR5643658	five period of Gastrodia elata	11.040
	SRR5643659	five period of Gastrodia elata	11.350
	SRR5643660	five period of Gastrodia elata	11.460
	SRR5643661	five period of Gastrodia elata	11.440
	SRR5643662	five period of Gastrodia elata	10.560
	SRR5643663	five period of Gastrodia elata	10.770
	SRR5643664	five period of Gastrodia elata	9.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.820
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.380
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.360
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.340
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.120
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.470
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.200
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.080
SRP279888	Gastro	Gastrodia elata tuber	13.50
	Juven	Juvenile tuber	11.20
	Mother_Gastro	Mother tuber of Gastrodia elata	12.21
	Mother_Juven	Mother tuber of Juvenile	12.08