Detail information of GWHGAAEX011263/evm.TU.scaffold_364.1
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|284035384|ref|YP_003385314.1| | 6.00E-38 | cytochrome P450 [Spirosoma linguale DSM 74] |
| KOG | KOG0156 | 7.00E-134 | Cytochrome P450 CYP2 subfamily |
| nr | gi|743763118|ref|XP_010911323.1| | 0 | PREDICTED: cytochrome P450 71A1-like [Elaeis guineensis] |
| Swissprot | tr|P24465|C71A1_PERAE | 1.00E-146 | Cytochrome P450 71A1 |
| trEMBL | tr|I6LM44|I6LM44_ELAGV | 5.00E-159 | P450 {ECO:0000313|EMBL:ADM88550.1} |
| TAIR | AT3G26330 | 7.00E-134 | cytochrome P450, family 71, subfamily B, polypeptide 37 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000356 | 63721 | 65598 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011263
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 34 | 496 | 7.20E-106 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B37 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.880 |
| SRR2545915 | Juvenile tuber | 6.950 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.550 |
| SRR5643514 | five period of Gastrodia elata | 0.100 | |
| SRR5643515 | five period of Gastrodia elata | 0.990 | |
| SRR5643524 | five period of Gastrodia elata | 0.420 | |
| SRR5643525 | five period of Gastrodia elata | 0.800 | |
| SRR5643528 | five period of Gastrodia elata | 4.890 | |
| SRR5643658 | five period of Gastrodia elata | 0.420 | |
| SRR5643659 | five period of Gastrodia elata | 3.170 | |
| SRR5643660 | five period of Gastrodia elata | 0.450 | |
| SRR5643661 | five period of Gastrodia elata | 1.470 | |
| SRR5643662 | five period of Gastrodia elata | 3.040 | |
| SRR5643663 | five period of Gastrodia elata | 2.460 | |
| SRR5643664 | five period of Gastrodia elata | 2.480 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.490 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.040 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.620 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.910 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.230 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.200 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.800 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.100 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.610 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.610 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.31 |
| Juven | Juvenile tuber | 0.06 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 27.43 | |
| Mother_Juven | Mother tuber of Juvenile | 26.68 |