Gene detail

Detail information of GWHGAAEX011270/evm.TU.scaffold_37.4

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|302038241\|ref\|YP_003798563.1\|	3.00E-11	hypothetical protein NIDE2940 [Candidatus Nitrospira defluvii]
nr	gi\|695030000\|ref\|XP_009402443.1\|	0	PREDICTED: uncharacterized protein LOC103986229 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0T290\|M0T290_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P27650_001}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	136933	145577	+

Transcript Sequence
>GWHTAAEX011270 ATGGAAAAAAGGCACCTTTGGGTGAGCTGCGCATTGCTATACGGCCTTCTAATCAGCTGCGCTGGTGCTCAAGCTCATCCCTTTCCCCAAAACAGAAGCTTGAACAAAGAATTCAAGCAGAGAACAAATAAATTCTGGGAGTTTGAAGAGAAAGCGAGGAGATGGGTGGAGATCAGCCTTCCTTTCGATTTAATATCATGCGCCAATGGAAGCTGCGACAGGGTTGGGTCGATCAAGGACTGGAAGGCCCGAAATGGTGCAGAAACTCGAGGGAAGAAGACCAAGAGGACGGATTGCGATCCAGTTCTGCCTGTGAGGAAGAGGCTCTCGATCGCAAGGCTCTCAGAGGCTTCCATATGGGTCACAGGCCAAAGCGGGTCAATATATGAGAGGTTCTGGAATGGGGTGAGATGGGTCTTTGCTCCTCATGAGTTGCCCGGTTCGGCCGGACCTGCGCTCTCCGTTTTCATCATCAATCAGACCTTTCTCGCCCTCTCCGAAGCTGGGATGCTTTATCAGCTGCAATTGAATGAAAACTCTGAGGCTGTCTGGAGTGACTTTGTGCTGAAATCTGAACCGAACATTGATGCTGCAGAAGCAGAACAAAGCATGACCATGAGGATAAAGACTGGTGCAATATCTCATGATGGAGAGAGGTTGTTCTTGACTACAATGAAAGGATCACTGCTAGAAATTAGTGAATTGCAGCCTTTGAGGTGGGAGAATCACGGGCGGCCTCCCGGTGGAGATGTCTCTTCCATGGCAGACACAGGCATACTTAAAACAAGTGCTGTGTTCTCAATAAGTTCGAGTGGAGATCTGTATGAATTTGATAAGAGGACGAAGCCATCTTGGAAGAAGCATATATGGAGTGAAGCATCTGCCGAAGCTGTTCCTTTAGCAGCGTCTTTTGGGTGCGCTGTGCATGGCTTAGTGGGAGCTCATTCGCTCTCTCTTTTCCTTCTGGCAAAGGATGGCTTTCTGATAGAGAGACGCTTGCACAAAAGGAAGTGGAAATGGATGATCCACGGAGCCCCCAAAGGTCACCAGCTGAGTGCCCTCACATCGATCCATCAGCAAATTAGCGACAAGATGCTCTCAATTTTCTTCTCCACAAGCAACGGCTTCGTATTTGAATATCAGCTTCCCAAGCATTCATCAGCTACGAACGGCGAGGATGGGAAGGCCCAAGGGGCGTGGGTGAATCATGTGCATCCGCCGCAGGCAAAGATTGCGAGGGGCGCGAGCGGCGCTCAGCTCCAACCTGGAAGGATCGTCTTCCCTTTGGACGATGGGAGGCTCGCAGAGCTGCATCTCCCAGGATTGGGCGGCGATGGCGTTGGCCCCATTCATCAGACCAGCATCAGAAGAAAAGCTTCTTCTTCTTCCTTTAAGTACCAATGGTCGACCCTCGACGCCCCCGAATCCGAAGGATGGAATGCCCAGTACTGCACTCTCGAGCGCGGTCCCTTAAACTGCATCGCGGGAGCCAACGATGCTCCTGCCCACCACCAAATCAGCCCTCCGCATCAAAATTACATCTTGTTCACTGATTCCCAGCAAAGCTCCGACCTTTCCGTGCAGAGCGTAAGATCTAATTTCCGGATGAGGGTAATGCAAAGGGATAGATCACTGTTTCTCGTGTCCGACAACGGCCAGACTTTCGAGTATCTGTACAGTGACAGCATTTGGCTGTGGCTGAGACACGAGCACCCCACGGCCATGACCGGCATTTTGGGAAGCTACAATGGGAGCGTGAGCTTGGTCGATCTGCAGGGGAACTTGCTTATGAGGGAGAGGATTGGGAAAGAGCTCTCTTGGGTCAACTGCACTTCTCTTAAGAGAGGAAAGCGTGTGGCCACTGGACCTCCTTGGGATGCTACGCCTGGCAGGATCTCGGCTGATGATTCTCTCTTTTTTGTGAGTAAAAGAGGGAGATTGCTTCAGTTTATGGTTGCGCATCGAAGATTCAAGTGGAAGGATTGCGGGAGCCCTTTGAATTCCCGGGTGGCGTTCATTGTTGATCAAGAGGGATTCAGGATGAATGTGGTGTTTGTCGTTGGGAGGAACGGACGGCTTTACCAGTACAACAAGCTGATGGAACTGTGGCATGAGCACTACCAGTCTCCCCATTTGGTGCTTTCGAGGTCAACTGGGACGGCCATGAGGCCATCACTGGCTTCTCTCAGTGGATCCATCTTCATGATATCGGAGAATGGTGGTCTTGTGGAGTATCATTGGAGCTCAATGTATGGATGGGAATGGGTGGAGCATGGAACTCCTGACAGGGAAGTGAAGCTGGTTGGGGCGCCGGGGCCTTGCCTTGGAGACAGGGAGCTGTTCTTGATTGGCTCAAACGGCTGCGTTTATAGAAGGCATTTGGATGAGGGGACATGGAAATGGACAAACTATGGATACCCAAAAATAAAAGACGCGGCAATAGAGGCCATAGTTGAAACAATGAGAGAACAGAGCTGCGCAGCAGAGGGACATCTTTCACAGCATGAGGAGGAGACTGATAGCTATGCAGACAGTTTAAGGAAGTACTGCAATGAGAAGGTGGCTGCAGTGCGCCCAATACCATTTTCTGAAGACTCATTGGTGTTCGAGTTACAGGATGCTAGGATAGCAGAGCTGCGACGATGTGAGACGGCGGCAACAGGATGGGAGTGGGCACGAATCATCGGAACACCTACAAGCCTTTGCCTGACAAATTACTGGGCAACAATGGCATAATTATATGAAATGCTGAATGATATACATGTAATTACAGTATAGATTATGTTTTTGAAAGAAACATGAACATTAAAGAGCAGCAGCACAGTAGGCTGTAGTGGTATAGAGCTATACAAATGTACTGGTTGACACAATAGCTGGCGACCCTTATGTAGAATAATACACAGAAGTATATAGAATGACTTGTTAAAATAAAACTAATTTTAATGGTTGATGAAAACATTTTTAGAGGTCATGGGAATGCTAAGCTTATGTGAAAAGTGAGATAATGCATTTTAATCATCATATAATGCTTGGATTTAAATAGAG

Network for GWHGAAEX011270

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.150
SRP064423	SRR2545915	Juvenile tuber	11.140
SRP108465	SRR5643513	five period of Gastrodia elata	36.610
	SRR5643514	five period of Gastrodia elata	41.900
	SRR5643515	five period of Gastrodia elata	26.100
	SRR5643524	five period of Gastrodia elata	39.110
	SRR5643525	five period of Gastrodia elata	45.100
	SRR5643528	five period of Gastrodia elata	25.200
	SRR5643658	five period of Gastrodia elata	43.300
	SRR5643659	five period of Gastrodia elata	13.100
	SRR5643660	five period of Gastrodia elata	15.200
	SRR5643661	five period of Gastrodia elata	12.350
	SRR5643662	five period of Gastrodia elata	11.760
	SRR5643663	five period of Gastrodia elata	13.230
	SRR5643664	five period of Gastrodia elata	12.760
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.610
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	24.050
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	26.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	21.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	21.080
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.410
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.520
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	26.700
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	22.180
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.130
SRP279888	Gastro	Gastrodia elata tuber	19.09
	Juven	Juvenile tuber	27.76
	Mother_Gastro	Mother tuber of Gastrodia elata	25.82
	Mother_Juven	Mother tuber of Juvenile	22.33