Detail information of GWHGAAEX011285/evm.TU.scaffold_37.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|194337882|ref|YP_002019676.1|1.00E-08SEFIR domain-containing protein [Pelodictyon phaeoclathratiforme BU-1]
nrgi|695063468|ref|XP_009420238.1|2.37E-177PREDICTED: uncharacterized protein LOC104000028 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RFI3|M0RFI3_MUSAM1.00E-178Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P05060_001}
TAIRAT3G543607.00E-153zinc ion binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000043515558531977-
Transcript Sequence

Network for GWHGAAEX011285

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13424.5TPR_122273011.20E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms74.180
SRR2545915Juvenile tuber51.990
SRP108465SRR5643513five period of Gastrodia elata28.600
SRR5643514five period of Gastrodia elata25.170
SRR5643515five period of Gastrodia elata24.620
SRR5643524five period of Gastrodia elata25.500
SRR5643525five period of Gastrodia elata29.870
SRR5643528five period of Gastrodia elata30.520
SRR5643658five period of Gastrodia elata37.650
SRR5643659five period of Gastrodia elata24.470
SRR5643660five period of Gastrodia elata30.020
SRR5643661five period of Gastrodia elata25.770
SRR5643662five period of Gastrodia elata29.980
SRR5643663five period of Gastrodia elata26.030
SRR5643664five period of Gastrodia elata37.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.710
SRR6049655Rhizomagastrodiae_C368-T10_good_133.480
SRR6049656Rhizomagastrodiae_C368-T07_good_128.700
SRR6049657Rhizomagastrodiae_C368-T07_good_155.970
SRR6049658Rhizomagastrodiae_C368-T04_good_162.800
SRR6049659Rhizomagastrodiae_C368-T04_good_176.440
SRR6049660Rhizomagastrodiae_C368-T01_good_142.360
SRR6049661Rhizomagastrodiae_C368-T04_good_146.110
SRR6049662Rhizomagastrodiae_C368-T01_good_124.210
SRR6049663Rhizomagastrodiae_C368-T01_good_129.650
SRR6049664Rhizomagastrodiae_C368-T10_good_125.140
SRR6049665Rhizomagastrodiae_C368-T10_good_125.140
SRP279888GastroGastrodia elata tuber 47.07
JuvenJuvenile tuber33.87
Mother_GastroMother tuber of Gastrodia elata 48.87
Mother_JuvenMother tuber of Juvenile 35.07