Detail information of GWHGAAEX011291/evm.TU.scaffold_37.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27220Predicted membrane protein
nrgi|695010008|ref|XP_009391659.1|0PREDICTED: uncharacterized protein LOC103977776 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0U0Z0|M0U0Z0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P16830_001}
TAIRAT5G019900Auxin efflux carrier family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000043750321795447+
Transcript Sequence

Network for GWHGAAEX011291

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03547.17Mem_trans284089.90E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.860
SRR2545915Juvenile tuber16.150
SRP108465SRR5643513five period of Gastrodia elata16.120
SRR5643514five period of Gastrodia elata14.010
SRR5643515five period of Gastrodia elata14.780
SRR5643524five period of Gastrodia elata17.570
SRR5643525five period of Gastrodia elata13.210
SRR5643528five period of Gastrodia elata9.880
SRR5643658five period of Gastrodia elata12.950
SRR5643659five period of Gastrodia elata16.370
SRR5643660five period of Gastrodia elata13.140
SRR5643661five period of Gastrodia elata16.120
SRR5643662five period of Gastrodia elata19.320
SRR5643663five period of Gastrodia elata15.650
SRR5643664five period of Gastrodia elata9.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.130
SRR6049655Rhizomagastrodiae_C368-T10_good_19.120
SRR6049656Rhizomagastrodiae_C368-T07_good_112.900
SRR6049657Rhizomagastrodiae_C368-T07_good_112.540
SRR6049658Rhizomagastrodiae_C368-T04_good_114.210
SRR6049659Rhizomagastrodiae_C368-T04_good_112.800
SRR6049660Rhizomagastrodiae_C368-T01_good_112.480
SRR6049661Rhizomagastrodiae_C368-T04_good_117.810
SRR6049662Rhizomagastrodiae_C368-T01_good_122.820
SRR6049663Rhizomagastrodiae_C368-T01_good_115.380
SRR6049664Rhizomagastrodiae_C368-T10_good_115.710
SRR6049665Rhizomagastrodiae_C368-T10_good_115.710
SRP279888GastroGastrodia elata tuber 14.42
JuvenJuvenile tuber8.36
Mother_GastroMother tuber of Gastrodia elata 18.15
Mother_JuvenMother tuber of Juvenile 7.68