Gene detail

Detail information of GWHGAAEX011300/evm.TU.scaffold_37.38

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521464512\|ref\|YP_008151634.1\|	2.00E-22	hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
KOG	KOG1187	0	Serine/threonine protein kinase
nr	gi\|695056228\|ref\|XP_009416326.1\|	0	PREDICTED: receptor-like protein kinase FERONIA [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	0	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|M0TLS3\|M0TLS3_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P01710_001}
TAIR	AT3G51550	0	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	917906	921257	-

Transcript Sequence
>GWHTAAEX011300 AGAGAGAGAAGCTGAGAGAGAGGGCTACAGTACGTAGTCGTCTTCGTCCTCGCTGCCTTCTCCGCGTTGTCAGGTTCTGCTGCTCTCTCGCTCTCTCGTACTCTCTCTAAGACAATACTCCTAAAGATTTCAAAGAAACCCTCCATTTTCTCTCCTTAGTTTATCGATTTAACTTCGCACTGTTCGATCCAATCTTCTTGATATCATCCCGGCTCCAATCTCGCAGCCGATCAGTGTCGGAATCAGATTCTAGATCGGCTTCTTTCATCATCAACTTGAGCTGATCCGGCGATTTCTCTGCCCAAATCCCTAAGATCAGCTCCCGATCTGGATTTTACTTGGCCCTGTTCGACCCAATCTTCTTGATATCATCCTGCCGCTCAGGTCAGCTCCGATCTCGCAGCCGAGCAGTTTCGGAATCGGAGCTTCTTTCTAGATCGGCTTATTTCATCATCAGCATGAGCTGATCCTCAGGCGATTTCTCTGCTCGAAGCGATGAACTTGCTTCGGTTCCTGATTCTTTTGTCTGTAGCCGCCATCGTTTCCGGAGATAACTCCACCTTCGTTCCACGGGACTACATACTCCTTAACTGCGGATCCTCCGGCCAGAACAACGATCTGGATGGACGGACTTGGAACGGCGACACCGGATCCAAGTACGCTCCCTCTCTGACCTCCGCTGGCTACGAAGCATCCATCCAGGATTCTTCGGTTCCTCAGTACCCCTTTCTCACGGCTCGAGTGTTCTCCTCCCCTTTCACCTACACCTTCCCCCTCGGCTCCGGCCGTAAGTTCCTTCGCCTCTATTTCTACCCTTCCAACTACTCCGGCCATTCCGCCGACGACGACCTCTTCTCCGTCACCGTCGGTCCAGTTACCCTCCTCAAGAACTTCTCCGCTTACCAAACCGCCGAAGCCCTCAACTTCGTCTACCTCATTCGGGAGTTTTCCGTCAACGTCTCCTCTTCTGGCCTCAACCTCACTTTCACCCCATCGAAGAACCACTCCAATTCTTACGCTTTCATCAACGGCATAGAGATTGTCTCTACGGCGGACCTTTTCTCCGCCTCGATTCCTCTGCTGGTGTCTCCCGGGACCCCGATTCAGTATCCGATTCAAGACAATTGGGCGATGGAGACGGTTTATCGGCTGAACGTAGGCGGCCAGGCGATCTCTTCTTCGGGAGATTCGGGAATGTATCGATCCTGGGAGGATGATTCGATGTACATTTACGGAGCTGGTATCGGAGTATCTTACGCCGCCAATTCGAACGTAACCATTCACTACTCCGCCGATGTCCCGGAGTTCATCGCGCCCGACGATGTGTATGGCACGGCGAGATCGATGGGACCTGATCCGAACGTGAACAAAAATTACAACCTGACATGGATTCTGAGCGTCAACGCCGGCTTCTCCTACCTCGTCCGGTTTCATTTTTGCGAGATTCAGTATCCTATCACCAAGGTGAATCAGAGGGTTTTCAACATCTATCTGAACAATCAGACAGCGCAAGAGGCTGCAGATGTGATTGCTTGGAGCAGTGGGATCGGCAAGCCTGTGTATAAGGATTATGTCGTTCTAACAACAGGATCTGGGATGATGGATTTGTGGGTGGCTCTCCAACCTGATCTCAGGTCCAGGCCGCAGTTCTTCGACGCGATCCTGAATGGAATGGAGGTCTTCAAGCTGCAGGATGCTGATAACAATCTCGCCGGACCGAACCCAGAGGTTCCGCCGCAGCCGGATGTCGAGCCCGGCAAAGTGCTGAGGCGTCGGAAATCTCACGGCAGGACTGCTGCTGCGGTTGGAGGGGCGGTAGCTGGGGGCGGCGTTGTCGTGCTGGGCCTGCTCTCCCTTTGGTACCTGAGGAAGACGAAGGGGAAGGGGAAGAAGGACGGGGGCGCGAGCGACGGCGGACCGTCGGGGTGGCTCCCCCTTTCGCTCTACGGGAACTCGCACTCGTCGACTTCGGCGAAGACGAACACGACGGGGAGCTACGCGTCCTCGCTGCCGTCGAACCTGTGCCGGCACTTCTCGTTCGCGGAGATTGAGGCGGCGACGAGCAAGTTCGACGAGGCGCTGCTGCTGGGGGTGGGGGGGTTCGGGAAGGTGTACCGGGGGGAATTGGATGACGGGACGAAGGTGGCGATCAAGCGGGGGAACCCGATGTTGGAGCAGGGGGTGCACGAGTTCCAGACGGAGATCGAAATGCTGTCGAAGCTGCGGCACCGGCACCTCGTGTCGCTGATCGGGTACTGCGAGGACAACAGGGAGATGATCCTGGTGTACGACTTCATGGCGCACGGCACTGTGCGGGAGCACCTCTACAAGACGCAGGAGCCGCCGCTTCCGTGGAAGCAGCGGCTGGAGATCTGCATCGGGGCCGCCCGCGGGCTGCACTACCTGCACACGGGCGCCAAGCACACCATCATCCACCGGGACGTGAAGACCACCAACATCCTCCTGGACGAGAAGTGGGTGGCAAAGGTCTCCGATTTCGGCCTCTCGAAGGCCGGCCCGACGCCGGACAACACGCACGTGAGCACCGTCGTGAAGGGCAGCTTCGGGTACCTGGACCCGGAGTACTACCGCCGGCAGCAGCTGACGGAGAAGTCCGACGTGTACTCCTTCGGCGTCGTACTGTTCGAGGTCCTCTGCGCCCGACCGGCGCTCAACAGGTCGCTCGCCAAGGAGGAGGTCAGCCTGGCCGAGTGGGCCCTGCATTGCCAGAGGAAGGGCGTCCTCGACCAGATCATCGACCCCTACCTCAGAGGCAAGATCGCCCCGCAGTGCTTCAGGAAGTTCGCCGAGACCGCCGAGAAGTGCGTTTCCGATCAGGGCATTGACCGCCCGGCAATCGGCGACGTGCTCTGGAACCTCGAGTTTGCCCTCCAGCTGCAGGAGAGCGCAGAGGAGGCCGGTGACGATGGAATCTCCGATGCGGCGCCCGGATTGATGAAGGATGCCGACGACAACCCATCGACAGAGTCGGGGACGACGACGACAACGACGACCGCAACGATGTCGTCAACCTCCACGAGCATGGGCGGGAGGAGCATGGTCAGCCAGGACTCGGAGGGGCTAACCCCCAGCGCCGTCTTCTCCCAAATCATGAACCCAAAGGGGCGTTGAGAAGCTCACGCATCTCATCCTCATGTCTATTAAGCTATCGTTGCCTTTTCTCTATTCTTGTTGATTTTTATGCCAGTGTCCTCTTCTCCTGTTCTTCTTATGAATGATACTGTTTAGGTTTAAAATTATTTTTTGATGATGTTGTGGTCTCCTGAACCAGTCAGTTTAGGTAGGCATTGAACTAAACTTATTGGTAATATTTTTCATAGTAGAATTTGGG

Network for GWHGAAEX011300

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12819.6	Malectin_like	31	397	5.30E-38
PF07714.16	Pkinase_Tyr	531	791	1.60E-46

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	33.560
SRP064423	SRR2545915	Juvenile tuber	29.380
SRP108465	SRR5643513	five period of Gastrodia elata	58.810
	SRR5643514	five period of Gastrodia elata	48.140
	SRR5643515	five period of Gastrodia elata	56.260
	SRR5643524	five period of Gastrodia elata	44.210
	SRR5643525	five period of Gastrodia elata	83.010
	SRR5643528	five period of Gastrodia elata	56.600
	SRR5643658	five period of Gastrodia elata	86.870
	SRR5643659	five period of Gastrodia elata	66.060
	SRR5643660	five period of Gastrodia elata	55.170
	SRR5643661	five period of Gastrodia elata	69.540
	SRR5643662	five period of Gastrodia elata	69.490
	SRR5643663	five period of Gastrodia elata	58.130
	SRR5643664	five period of Gastrodia elata	97.100
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	86.060
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	87.170
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	83.790
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	84.110
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	68.340
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	80.560
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	96.810
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	90.240
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	74.410
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	89.850
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	74.360
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	74.360
SRP279888	Gastro	Gastrodia elata tuber	51.10
	Juven	Juvenile tuber	65.21
	Mother_Gastro	Mother tuber of Gastrodia elata	69.29
	Mother_Juven	Mother tuber of Juvenile	52.05