Detail information of GWHGAAEX011303/evm.TU.scaffold_37.42
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|307720288|ref|YP_003891428.1| | 2.00E-12 | ATPase P [Sulfurimonas autotrophica DSM 16294] |
| KOG | KOG0206 | 0 | P-type ATPase |
| nr | gi|672181260|ref|XP_008810842.1| | 0 | PREDICTED: phospholipid-transporting ATPase 1-like [Phoenix dactylifera] |
| Swissprot | tr|P98204|ALA1_ARATH | 0 | Phospholipid-transporting ATPase 1 |
| trEMBL | tr|A0A067JQP3|A0A067JQP3_JATCU | 0 | Uncharacterized protein {ECO:0000313|EMBL:KDP21859.1} |
| TAIR | HS17978471 | 0 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000043 | 1100451 | 1124837 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011303
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16209.4 | PhoLip_ATPase_N | 127 | 192 | 1.30E-22 |
| PF00122.19 | E1-E2_ATPase | 224 | 471 | 7.30E-08 |
| PF00702.25 | Hydrolase | 509 | 831 | 1.00E-07 |
| PF16212.4 | PhoLip_ATPase_C | 987 | 1227 | 2.30E-73 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015914 | Biological Process | phospholipid transport |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0140326 | Molecular Function | ATPase-coupled intramembrane lipid transporter activity |
| GO:0000166 | Molecular Function | nucleotide binding |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 33.140 |
| SRR2545915 | Juvenile tuber | 27.740 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.750 |
| SRR5643514 | five period of Gastrodia elata | 13.670 | |
| SRR5643515 | five period of Gastrodia elata | 11.810 | |
| SRR5643524 | five period of Gastrodia elata | 13.120 | |
| SRR5643525 | five period of Gastrodia elata | 19.790 | |
| SRR5643528 | five period of Gastrodia elata | 15.900 | |
| SRR5643658 | five period of Gastrodia elata | 22.710 | |
| SRR5643659 | five period of Gastrodia elata | 17.030 | |
| SRR5643660 | five period of Gastrodia elata | 16.640 | |
| SRR5643661 | five period of Gastrodia elata | 17.160 | |
| SRR5643662 | five period of Gastrodia elata | 19.400 | |
| SRR5643663 | five period of Gastrodia elata | 17.520 | |
| SRR5643664 | five period of Gastrodia elata | 19.140 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 15.670 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.680 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 14.930 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 18.390 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.500 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.340 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.210 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.780 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.370 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.640 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.640 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.75 |
| Juven | Juvenile tuber | 18.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 10.32 | |
| Mother_Juven | Mother tuber of Juvenile | 12.83 |