Detail information of GWHGAAEX011310/evm.TU.scaffold_37.52
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|258652797|ref|YP_003201953.1| | 3.00E-15 | cytochrome P450 [Nakamurella multipartita DSM 44233] |
| KOG | KOG0157 | 2.00E-20 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|695059114|ref|XP_009417901.1| | 0 | PREDICTED: probable cytochrome P450 313a1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|H1A988|C7254_GLYUR | 8.00E-22 | 11-oxo-beta-amyrin 30-oxidase |
| trEMBL | tr|M0SD38|M0SD38_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P09210_001} |
| TAIR | 7299666 | 2.00E-20 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000043 | 1259732 | 1286464 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011310
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 136 | 589 | 8.60E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP709B2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 31.730 |
| SRR2545915 | Juvenile tuber | 36.690 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.100 |
| SRR5643514 | five period of Gastrodia elata | 22.720 | |
| SRR5643515 | five period of Gastrodia elata | 19.870 | |
| SRR5643524 | five period of Gastrodia elata | 21.340 | |
| SRR5643525 | five period of Gastrodia elata | 24.710 | |
| SRR5643528 | five period of Gastrodia elata | 13.430 | |
| SRR5643658 | five period of Gastrodia elata | 23.020 | |
| SRR5643659 | five period of Gastrodia elata | 32.030 | |
| SRR5643660 | five period of Gastrodia elata | 34.750 | |
| SRR5643661 | five period of Gastrodia elata | 33.230 | |
| SRR5643662 | five period of Gastrodia elata | 23.050 | |
| SRR5643663 | five period of Gastrodia elata | 24.920 | |
| SRR5643664 | five period of Gastrodia elata | 18.800 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 27.960 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.420 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.630 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 30.470 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 32.360 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.720 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 29.540 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.770 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 22.620 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 22.620 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 32.41 |
| Juven | Juvenile tuber | 30.59 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 29.15 | |
| Mother_Juven | Mother tuber of Juvenile | 39.53 |