Detail information of GWHGAAEX011313/evm.TU.scaffold_37.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08002.00E-63FOG: Predicted E3 ubiquitin ligase
nrgi|695053723|ref|XP_009414967.1|2.83E-136PREDICTED: uncharacterized protein LOC103995940 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TUQ2|M0TUQ2_MUSAM2.00E-135Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P29490_001}
TAIRAT3G108102.00E-63zinc finger (C3HC4-type RING finger) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004313615131371979+
Transcript Sequence

Network for GWHGAAEX011313

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.130
SRR2545915Juvenile tuber8.150
SRP108465SRR5643513five period of Gastrodia elata10.410
SRR5643514five period of Gastrodia elata12.130
SRR5643515five period of Gastrodia elata10.630
SRR5643524five period of Gastrodia elata9.890
SRR5643525five period of Gastrodia elata7.470
SRR5643528five period of Gastrodia elata3.980
SRR5643658five period of Gastrodia elata6.390
SRR5643659five period of Gastrodia elata15.100
SRR5643660five period of Gastrodia elata12.620
SRR5643661five period of Gastrodia elata14.980
SRR5643662five period of Gastrodia elata12.620
SRR5643663five period of Gastrodia elata14.110
SRR5643664five period of Gastrodia elata11.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.440
SRR6049655Rhizomagastrodiae_C368-T10_good_114.400
SRR6049656Rhizomagastrodiae_C368-T07_good_112.540
SRR6049657Rhizomagastrodiae_C368-T07_good_18.230
SRR6049658Rhizomagastrodiae_C368-T04_good_15.590
SRR6049659Rhizomagastrodiae_C368-T04_good_16.010
SRR6049660Rhizomagastrodiae_C368-T01_good_110.040
SRR6049661Rhizomagastrodiae_C368-T04_good_110.550
SRR6049662Rhizomagastrodiae_C368-T01_good_111.560
SRR6049663Rhizomagastrodiae_C368-T01_good_19.010
SRR6049664Rhizomagastrodiae_C368-T10_good_111.210
SRR6049665Rhizomagastrodiae_C368-T10_good_111.210
SRP279888GastroGastrodia elata tuber 10.51
JuvenJuvenile tuber9.45
Mother_GastroMother tuber of Gastrodia elata 4.42
Mother_JuvenMother tuber of Juvenile 2.73