Detail information of GWHGAAEX011316/evm.TU.scaffold_37.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|385331503|ref|YP_005885454.1|2.00E-12NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Marinobacter adhaerens HP15]
KOGKOG27110Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase
nrgi|743845763|ref|XP_010938667.1|0PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [Elaeis guineensis]
Swissprottr|Q8S0G4|GPDH1_ORYSJ0Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic
trEMBLtr|M0RPS1|M0RPS1_MUSAM0Glycerol-3-phosphate dehydrogenase [NAD(+)] {ECO:0000256|RuleBase:RU361243}
TAIRAT2G4154006-phosphogluconate dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004314558881464255+
Transcript Sequence

Network for GWHGAAEX011316

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01210.22NAD_Gly3P_dh_N1472497.90E-10
PF07479.13NAD_Gly3P_dh_C2754286.00E-23
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00006GPD1 Biosynthesis of secondary metabolites map01110
Glycerophospholipid metabolismmap00564
MAPK signaling pathway - yeastmap04011

Gene Ontology

GO term OntologyName
GO:0006072Biological Processglycerol-3-phosphate metabolic process
GO:0046168Biological Processglycerol-3-phosphate catabolic process
GO:0005975Biological Processcarbohydrate metabolic process
GO:0055114Biological Processoxidation-reduction process
GO:0051287Molecular FunctionNAD binding
GO:0004367Molecular Functionglycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016491Molecular Functionoxidoreductase activity
GO:0009331Cellular Componentglycerol-3-phosphate dehydrogenase complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.850
SRR2545915Juvenile tuber16.910
SRP108465SRR5643513five period of Gastrodia elata17.970
SRR5643514five period of Gastrodia elata23.760
SRR5643515five period of Gastrodia elata18.090
SRR5643524five period of Gastrodia elata23.950
SRR5643525five period of Gastrodia elata8.970
SRR5643528five period of Gastrodia elata6.670
SRR5643658five period of Gastrodia elata7.410
SRR5643659five period of Gastrodia elata12.990
SRR5643660five period of Gastrodia elata14.250
SRR5643661five period of Gastrodia elata14.020
SRR5643662five period of Gastrodia elata12.520
SRR5643663five period of Gastrodia elata9.870
SRR5643664five period of Gastrodia elata10.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.460
SRR6049655Rhizomagastrodiae_C368-T10_good_117.610
SRR6049656Rhizomagastrodiae_C368-T07_good_118.900
SRR6049657Rhizomagastrodiae_C368-T07_good_114.690
SRR6049658Rhizomagastrodiae_C368-T04_good_114.920
SRR6049659Rhizomagastrodiae_C368-T04_good_116.290
SRR6049660Rhizomagastrodiae_C368-T01_good_118.280
SRR6049661Rhizomagastrodiae_C368-T04_good_115.510
SRR6049662Rhizomagastrodiae_C368-T01_good_121.710
SRR6049663Rhizomagastrodiae_C368-T01_good_121.000
SRR6049664Rhizomagastrodiae_C368-T10_good_119.770
SRR6049665Rhizomagastrodiae_C368-T10_good_119.770
SRP279888GastroGastrodia elata tuber 10.94
JuvenJuvenile tuber8.94
Mother_GastroMother tuber of Gastrodia elata 9.46
Mother_JuvenMother tuber of Juvenile 6.64