Gene detail

Detail information of GWHGAAEX011318/evm.TU.scaffold_37.61

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|337751456\|ref\|YP_004645618.1\|	4.00E-35	metallophosphoesterase [Paenibacillus mucilaginosus KNP414]
KOG	KOG1432	6.00E-163	Predicted DNA repair exonuclease SIA1
nr	gi\|743785418\|ref\|XP_010921900.1\|	0	PREDICTED: probable inactive purple acid phosphatase 16 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9SR79\|PPA16_ARATH	2.00E-163	Probable inactive purple acid phosphatase 16 (Precursor)
trEMBL	tr\|M0RYZ6\|M0RYZ6_MUSAM	8.00E-180	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P11370_001}
TAIR	AT3G10150	6.00E-163	purple acid phosphatase 16

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	1471528	1495204	-

Transcript Sequence
>GWHTAAEX011318 AAAAAAATAATAATAAAAATAAATAAAATAAAGACACCTTCGGTCATGGGAAGAATCGCCTCAAGAGCTGCTGCGCGGAGATGCGTCTTGCATTGGTTCTCTCCTTATCAGGAGTTTTATGGTTGAGTGCCTTACAAATGGCGCACAAGCGACAGCAGTTTATGGACATTCAAAATCATCTCTCTCCACGATTTTCAGTTCTTTACTGGCGAAAGAGCAAGAACAAGAGTTGTATTTCTCGATTAGTTTCAGAATACAGCATCCTTGCAGCGGTTTCAGATAATAAGCGGAATGAAGAGTCCTCTCTACGCTCTCGCCGCTGCTATTTTTGCTGTATCAATTTTCAGCACAGCTTCATTTGGCGCTGCCTGTGGCGGAGGGGAAAACGGAGACCGCCCTAGAGTTGGGAAGGGGCTGCAGTTCTTGCCTAATTCCTCTTTCAAGGTCGTACTCTTCGCAGATCTGCACTATGGCGAGAATGCCTGGGACGACTGGGGACCCGTCCAAGATCTCAATTCTGATCGGGTCCTATCGATTATCCTTGATAAAGAAATACCAGACTTTGTAATCTACCTTGGGGATGTCATTACTGCAAACAACATTGCAACTCCAAATGCAAGCATCTATTGGGATCAAGCCATTTCTCCTACTAGAGACAGAGGGATTCCTTGGGCAACATTATTTGGTAATCATGACGATGCATCATTTGAGTGGCCATTGGAATGGTTTTCGATTGCTGGAATTCCAGAGGTTCATTGTCCATCAAATACCTTTACATTTGGAGGAGAGAAGGATTGTAGCTTCAAAGGAACTGCACGAATTGAGTTGTTGAAAATGGAGAAAATAAAAAATCCATTATCTTATTCACAAAGTGGTCCTACTGAGATTTGGCCTGCTGTTTCCAATTATGTACTGCAAATTTCTTCTTCGAAAGACCCAAAATCACCGTCAGTTTTCTTATATTTTCTTGATTCTGGCGGAGGTTCCTATCCTGAGGTTATATCATATACTCAGGTTAAATGGTTTTTAAAGCAGGCACAAACAATCAATCCTAACTTAATGGTCCCTGAGTTGGTATTTTGGCATATTCCAAGTCAAGCATATAAGAAGGTAGCTCCTATTCCCAAGTCCTCAATAAAAGCTCCATGTGTTGGCTCTATTAACTTTGAAGAAGTTGCTTCCCAAGAAGCAGAATGGGGAATGATGGATGCTCTTTCGAACAGATCATCAGTAAAAGCAGTTTTTGTGGGTCACAACCACGGGCTGGATTGGTGCTGTCCGTACAGAAAATTGTGGCTCTGCTTTGCTCGTCACACAGGACACGGCGGCTACGGAGATTGGCCACGTGGCGCAAGAGTACTGGAGATGACCGAAGATCCCTTCTCCCTAAATTCCTGGATTAGAATGGAGGATGGCACTCTCTGCTCAGCCGCTTTTCTTTATTCTCCCTAACTTCCAAAGATATTTGAGAGAAAATGCACTGTACCTTTATTTTTTTCTTTCTAATTAATTCTAAAATTGAAATGTTATTTAGATCCGTTGACGCAGTGTGACTCCCAAAAAAACTCATTCTATGAGATTTGGACATTATTTCATAAGTGTTTAATTATTTATATTAAAATTTATATTGAATTGATATTTAAATTTTATTAAATATATTTTTTTAGG

Network for GWHGAAEX011318

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00149.27	Metallophos	50	323	4.40E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.030
SRP064423	SRR2545915	Juvenile tuber	4.850
SRP108465	SRR5643513	five period of Gastrodia elata	9.440
	SRR5643514	five period of Gastrodia elata	14.580
	SRR5643515	five period of Gastrodia elata	9.710
	SRR5643524	five period of Gastrodia elata	13.820
	SRR5643525	five period of Gastrodia elata	9.620
	SRR5643528	five period of Gastrodia elata	16.370
	SRR5643658	five period of Gastrodia elata	9.380
	SRR5643659	five period of Gastrodia elata	5.230
	SRR5643660	five period of Gastrodia elata	3.230
	SRR5643661	five period of Gastrodia elata	3.690
	SRR5643662	five period of Gastrodia elata	4.610
	SRR5643663	five period of Gastrodia elata	4.190
	SRR5643664	five period of Gastrodia elata	4.730
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.510
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.860
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.440
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.770
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.840
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.770
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.470
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.640
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.640
SRP279888	Gastro	Gastrodia elata tuber	3.51
	Juven	Juvenile tuber	5.32
	Mother_Gastro	Mother tuber of Gastrodia elata	6.60
	Mother_Juven	Mother tuber of Juvenile	6.32