Detail information of GWHGAAEX011329/evm.TU.scaffold_37.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521167109|ref|YP_008157911.1|9.00E-59adenine phosphoribosyltransferase [Serratia plymuthica S13]
KOGKOG17129.00E-97Adenine phosphoribosyl transferases
nrgi|743875692|ref|XP_010907390.1|6.46E-103PREDICTED: adenine phosphoribosyltransferase 1-like [Elaeis guineensis]
Swissprottr|Q43199|APT1_WHEAT4.00E-101Adenine phosphoribosyltransferase 1
trEMBLtr|B4FS03|B4FS03_MAIZE3.00E-101Uncharacterized protein {ECO:0000313|EMBL:ACF84896.1, ECO:0000313|EnsemblPlants:GRMZM2G131907_P01}
TAIRAT1G274509.00E-97adenine phosphoribosyl transferase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004317465341768473-
Transcript Sequence

Network for GWHGAAEX011329

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00156.26Pribosyltran1002231.50E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00759APRT, apt Metabolic pathways map01100
Purine metabolismmap00230

Gene Ontology

GO term OntologyName
GO:0006168Biological Processadenine salvage
GO:0009116Biological Processnucleoside metabolic process
GO:0003999Molecular Functionadenine phosphoribosyltransferase activity
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms145.950
SRR2545915Juvenile tuber165.430
SRP108465SRR5643513five period of Gastrodia elata166.610
SRR5643514five period of Gastrodia elata188.660
SRR5643515five period of Gastrodia elata273.560
SRR5643524five period of Gastrodia elata271.840
SRR5643525five period of Gastrodia elata155.100
SRR5643528five period of Gastrodia elata324.420
SRR5643658five period of Gastrodia elata148.320
SRR5643659five period of Gastrodia elata186.260
SRR5643660five period of Gastrodia elata166.890
SRR5643661five period of Gastrodia elata179.320
SRR5643662five period of Gastrodia elata173.160
SRR5643663five period of Gastrodia elata172.220
SRR5643664five period of Gastrodia elata124.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1126.480
SRR6049655Rhizomagastrodiae_C368-T10_good_1234.720
SRR6049656Rhizomagastrodiae_C368-T07_good_1144.840
SRR6049657Rhizomagastrodiae_C368-T07_good_1101.060
SRR6049658Rhizomagastrodiae_C368-T04_good_1112.320
SRR6049659Rhizomagastrodiae_C368-T04_good_1114.760
SRR6049660Rhizomagastrodiae_C368-T01_good_1120.560
SRR6049661Rhizomagastrodiae_C368-T04_good_1115.640
SRR6049662Rhizomagastrodiae_C368-T01_good_1178.460
SRR6049663Rhizomagastrodiae_C368-T01_good_1152.820
SRR6049664Rhizomagastrodiae_C368-T10_good_1198.410
SRR6049665Rhizomagastrodiae_C368-T10_good_1198.410
SRP279888GastroGastrodia elata tuber 249.93
JuvenJuvenile tuber176.26
Mother_GastroMother tuber of Gastrodia elata 1,268.37
Mother_JuvenMother tuber of Juvenile 687.67