Gene detail

Detail information of GWHGAAEX011331/evm.TU.scaffold_37.74

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|152993148\|ref\|YP_001358869.1\|	2.00E-12	co-chaperone-curved DNA binding protein A [Sulfurovum sp. NBC37-1]
KOG	KOG0715	1.00E-98	Molecular chaperone (DnaJ superfamily)
nr	gi\|743760953\|ref\|XP_010939775.1\|	0	PREDICTED: uncharacterized protein LOC105058515 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q38813\|DNAJ1_ARATH	3.00E-09	Chaperone protein dnaJ 1, mitochondrial (Precursor)
trEMBL	tr\|W9QY39\|W9QY39_9ROSA	2.00E-170	DnaJ homolog subfamily C member 16 {ECO:0000313\|EMBL:EXB28741.1}
TAIR	AT4G37480	1.00E-98	Chaperone DnaJ-domain superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	1926353	1981414	-

Transcript Sequence
>GWHTAAEX011331 TTCTTTATCGCACTTTATTTAGTTTTCTTTACTCAATTTAGTTAGTTTCACTTTTTTCTTATGTTTTCATGCACATTTTGTTTCCTCGAGCTTTAACATCTTGATTCCCTCCGTGGGCCAAATTTTTGTGCAGCCGTTTGGTAGTTTATTCTGCTTCTGCGCATGATTCTGGGGCGTGCTGCCTTGCAGCAGGAGCGATCTTTCCCTTTTCACACATTTCAAATCGACTGTTCTTCCATTCTGAAGCAGCGATTCCATAGCTGATGAACTACAAACCGTTCCTTCGAGAAGTCAATTACCTGTTCACTGCCAAGTGGAAGATCGCCTGCGAATATCATACAGGAAGATCCTTCAGCACGGCTGAATTGCGAGGCGACGAGTTTTCCGATAAGAGCGCTTATGAGGTTCTGGGGATATCGGAAAAGAGCTCTCCTGCTGAAATCAAGACTTCCTTTCGGAAGCTTGCTAAAGTAACACATCCGGACGTCTGTAGTTCTTCCGATGAGACCGCCTCCCTTCAGTTCCTCCAAGTTCTCGCTGCGTATGAGATTCTGTCCAACTCTGAAAGGAAGGCTCACTATGATGCCTATCTGCTATCACGGAAGGATACACTGCAAAAGAACTCAAACGCTTCAGTATATTACTCGTATTACTCTACTATAGCAATATCAAAACCAGAAGAGGTTGTTGAATGGTTAAAATGGCACAAAGAGGTTATTGATGAGATTATTATCAAGAAGAGAGTTGCAACTGGTACTGGTTATTTTGATAAACTTGAGAGTGAACTTTATTCGGCTATATGCTTTGCATATTATGGCCCTATTATTGAATCTGTAAATCTTTTGCCGAACAGTTTTGAAGCTGAGGAGAGGTCATATTGTGAAACTTCTGAAGTTCTGCATTTGGTTTCAGGAAGACATCTTTTTGGAATTATAAGTACTGTTGATAAGGCCATCAAATTATCAGCTCACTCAAAAAAGTTACCTCCTAGAGATTCTCAATGTTGTAGCATGGAAACGATGGGTATTAACTCAAATTTACCGGGATGTGGAGATTTTCAAGAATTTGAAGTGGAACAAAATAAAATCCATGCAACAGATATGTACAAAAGCCTGGAATTACATATTTTTGGGAAGCTAGTAGCTACAGCAACTAGGAGCCCTCCTTGCAAATCCAAAGACGGCTGCTCTATGGATGATAAGGAAGATCATATAAATGTCTTTCTTAATTTGTATGAAAATTTCTATATCAATAACGCTGGTCCTCAAAGTTCTAATGCAGTGGGGTCTAAGATTCTGTTGGGAACAATAACAGGGCTAGGACGTGATGCAGAAGAAGGAACATGCTCAGTTTATAATAAAAATGGACAAAAAACTCATGTTATAATAAAGCATAGAACATTACTGGTGAAGCACATGCACTGGTTTCAAATTGGCGAGGATGAAACTTCAGCTTACGAATGTAGATGCACGAGAGCCCACTTACCCCCAAGCAAATACTGGCTTTTTGAACCTCGTTCTTCCCTGCATGATGTTGGTGGTTGGTACATTGAAACATTTGGCCTAAACGAAAAGGGTAGGACAGTTCTTTCCCGAAGGCAATGGGATAGTGTTAACGAACATCCTGAAAAGAGACTCCATCCAGCTATATATTTATTAGCTCTTGCATATAGAACTTTAGATCTTGAAGACCGAAAAAGAAAAAAGATAACCATTAGAAAGTTTCTGGCGCCAAAAGTTAATAATATTCTTCGCTGGTGTAAAAGAATTCTATGATGATGGTATTGAAGAACTGGATGGTTCTATGCCAGAAAGATGGGTCAGCCATTGGCTTGTGAAATTTCAGCCATGTGATTTCTGCAGGTATGTGCCATATCCTTGATCAAACGTTCTTTAGTTTATTGTTCTTCCACCAAGCAGCTGCAATAACCTAAATCAAGTGCTGAATTTGTTCAAACGCTTATGATATTATACGGAATACTTCATCATCCCATTTGTAGTTTGGGCATCAGAAAAAATGTAAAATAGGCATTTCTATAAATACTAGTCGGAACAAATTAACATTTTGCAATTAACATAAATATTAATTTGTAACCTTTTTATATATTTTTTTAATATTATTTTGAG

Network for GWHGAAEX011331

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	45	107	2.10E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.050
SRP064423	SRR2545915	Juvenile tuber	13.540
SRP108465	SRR5643513	five period of Gastrodia elata	8.940
	SRR5643514	five period of Gastrodia elata	8.070
	SRR5643515	five period of Gastrodia elata	8.030
	SRR5643524	five period of Gastrodia elata	8.800
	SRR5643525	five period of Gastrodia elata	9.820
	SRR5643528	five period of Gastrodia elata	9.200
	SRR5643658	five period of Gastrodia elata	10.410
	SRR5643659	five period of Gastrodia elata	10.000
	SRR5643660	five period of Gastrodia elata	10.650
	SRR5643661	five period of Gastrodia elata	9.920
	SRR5643662	five period of Gastrodia elata	10.130
	SRR5643663	five period of Gastrodia elata	9.050
	SRR5643664	five period of Gastrodia elata	10.800
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.570
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.190
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.710
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.440
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.380
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.740
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.960
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.530
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.530
SRP279888	Gastro	Gastrodia elata tuber	11.76
	Juven	Juvenile tuber	13.89
	Mother_Gastro	Mother tuber of Gastrodia elata	11.07
	Mother_Juven	Mother tuber of Juvenile	14.57