Detail information of GWHGAAEX011335/evm.TU.scaffold_37.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|407461739|ref|YP_006773056.1|7.00E-20thioredoxin [Candidatus Nitrosopumilus koreensis AR1]
KOGKOG09077.00E-50Thioredoxin
nrgi|695022514|ref|XP_009398388.1|3.37E-52PREDICTED: thioredoxin H1-like [Musa acuminata subsp. malaccensis]
Swissprottr|P29448|TRXH1_ARATH2.00E-50Thioredoxin H1
trEMBLtr|M0SR53|M0SR53_MUSAM1.00E-52Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}
TAIRAT3G510307.00E-50thioredoxin H-type 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004320689242086602-
Transcript Sequence

Network for GWHGAAEX011335

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin881873.70E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03671trxA NOD-like receptor signaling pathway map04621

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms116.710
SRR2545915Juvenile tuber201.080
SRP108465SRR5643513five period of Gastrodia elata534.530
SRR5643514five period of Gastrodia elata735.740
SRR5643515five period of Gastrodia elata566.030
SRR5643524five period of Gastrodia elata690.370
SRR5643525five period of Gastrodia elata553.790
SRR5643528five period of Gastrodia elata654.840
SRR5643658five period of Gastrodia elata631.650
SRR5643659five period of Gastrodia elata369.450
SRR5643660five period of Gastrodia elata434.330
SRR5643661five period of Gastrodia elata435.490
SRR5643662five period of Gastrodia elata450.710
SRR5643663five period of Gastrodia elata410.840
SRR5643664five period of Gastrodia elata516.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1220.170
SRR6049655Rhizomagastrodiae_C368-T10_good_1216.480
SRR6049656Rhizomagastrodiae_C368-T07_good_1217.740
SRR6049657Rhizomagastrodiae_C368-T07_good_1171.760
SRR6049658Rhizomagastrodiae_C368-T04_good_197.090
SRR6049659Rhizomagastrodiae_C368-T04_good_168.720
SRR6049660Rhizomagastrodiae_C368-T01_good_1115.490
SRR6049661Rhizomagastrodiae_C368-T04_good_170.580
SRR6049662Rhizomagastrodiae_C368-T01_good_1117.000
SRR6049663Rhizomagastrodiae_C368-T01_good_197.580
SRR6049664Rhizomagastrodiae_C368-T10_good_1323.410
SRR6049665Rhizomagastrodiae_C368-T10_good_1323.410
SRP279888GastroGastrodia elata tuber 447.34
JuvenJuvenile tuber789.38
Mother_GastroMother tuber of Gastrodia elata 569.94
Mother_JuvenMother tuber of Juvenile 952.23