Gene detail

Detail information of GWHGAAEX011337/evm.TU.scaffold_37.80

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|720058195\|ref\|XP_010274208.1\|	4.39E-123	PREDICTED: transcription factor UNE12 isoform X1 [Nelumbo nucifera]
Swissprot	tr\|O22768\|UNE12_ARATH	2.00E-79	Transcription factor UNE12
trEMBL	tr\|D7T780\|D7T780_VITVI	5.00E-123	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI26351.3}
TAIR	AT4G02590	6.00E-79	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	2147814	2154725	-

Transcript Sequence
>GWHTAAEX011337 AAATTGGCTGCCTTCTCCACTTTCTCAGCTCTCTAAAGAAGGAAAATATTGAGACAAATCAGGACTACGCCGGAAGAGATTCTTCCGCTCCTGGCATCAATCCCTCCATCGCATGCCTTATCCTCTCCGATCGATGCCCTATGTGAGATTCGACGAATTCCATTCATCCCGCCATGGCAAATCACCCTCAGGCTCCACCGGACGGAATTGACGATTTCATTGAACAAATTTTCTCCATGCCTGGATACGCCTCCGCTGACCCCGGCCTTTCCGCCGGCGACGGAAGTGTGCAGCCTTTCAGCTCCGGTGATGGATCAGGCTCCGGCGGTTTCGCGGTTTTTCCGCTCGGGCTGAGCTTGGAGCAAGGAAGGTCAGATGAGGGTTCAAGCGGTAGTGGAGTTGGGAAACGGTTGAGGGAGGTTTCTGAGGGGAGGGCATCGACGGAAGTTGAAAGGGATTCAGCTCAGCTGGGGAGCTTGTTTCCGGCATTTGGGCACGTGCAATCTCATCAAATGCGGCCTAATTCTCCTCAGATTCTCCATGGACAATCAATGCAAGTACCAATAGCTTCAATGCCACAACCACCAGCTCCCCGTCCACGTGTGAGAGCAAGACGAGGACAAGCTACTGATCCCCACAGCATTGCAGAGAGACAACGGCGAGAAAGAATAGCAGAGAGGATGAGAGCCTTGCAGGAATTAGTTCCCAATACTAACAAGACAGATAGAGCAGCCATGCTAGATGAAATTGTAGATTATGTGAAGTTTCTGAGGCTTCAAGTTAAGGTTTTATCTATGAGCAGATTGGGTGGTACTGGTGCTGTAGCACAACTTGTAGCTGACATTCCAATATCACAAGCTGAGGGAGACGGCGACATCGACGTTCAGATCAAGCAGCAGCAGCAGCAAGTTTGGGAAAAATGGTCCAATGACGGCACAGAGCGGCAAGTAGCAAAGCTCATGGAAGAGGACGTGGGCGCGGCAATGCAGTTCCTGCAGTCGAAAGCCCTGTGCATGATGCCAGTATCCCTCGCCGCCGCCATCTACCAAACGCAAATGCAGAATCAAACTGACAACACCCCCTCCGTGAAGCCTGAACCAAACGCATCTCCATCATGATCAGTTTCTTCTCTTTCAAACAGGTCTGATCTTGTCTTCTTCCTTGCACTTTTATTTGTTTTCCTTGCCTTGGCTTGTCAATGATGATATCAAAGAAATTGGAAAAGAGTCAACAAGCAAAGGAGCAAAGGAGAGGCCACTTCCAGCAGCTGTCTCTACTTTCTCTATTATGTCCTCTTTCTCAGTGCTCCTTTAAGCTTCCCACTTTCTTAAATTTTGCTTTTGTGGGGTTCTGATGACGGGGATTTTAGCCTTTCTTTTTGTAGTGGGAAGTGTGGGGCCTTCTTCAAAAGGTGATGATCTAAAAATCAATCATGCTGCTGAAGTAGATAGCTTTATATATATATATATATATATATATATGAATATGATCATGATAAGGATGATTGCCTATGGTAAAATGATTTTATTCTCATTTAGGTCATCCATATTGGAATATTGTTTAGTTGGGTCAATGAAAGGATCAAAAGCCATTGATACAATCTATTTCTAAAAAGATTGGCTATGCTTCCCTACTCAAATTCAAAATTAAATTTAAGTAATATTGGATAATATGTTTTTGGAGTGTGA

Network for GWHGAAEX011337

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00010.25	HLH	155	199	1.30E-07

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bHLH

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046983	Molecular Function	protein dimerization activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	66.380
SRP064423	SRR2545915	Juvenile tuber	37.150
SRP108465	SRR5643513	five period of Gastrodia elata	47.150
	SRR5643514	five period of Gastrodia elata	48.580
	SRR5643515	five period of Gastrodia elata	26.100
	SRR5643524	five period of Gastrodia elata	36.310
	SRR5643525	five period of Gastrodia elata	99.400
	SRR5643528	five period of Gastrodia elata	53.700
	SRR5643658	five period of Gastrodia elata	112.570
	SRR5643659	five period of Gastrodia elata	24.430
	SRR5643660	five period of Gastrodia elata	28.890
	SRR5643661	five period of Gastrodia elata	25.870
	SRR5643662	five period of Gastrodia elata	32.630
	SRR5643663	five period of Gastrodia elata	32.700
	SRR5643664	five period of Gastrodia elata	42.890
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	61.800
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	63.690
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	58.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	81.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	67.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	83.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	72.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	62.210
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	43.380
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	45.410
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	51.740
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	51.740
SRP279888	Gastro	Gastrodia elata tuber	29.92
	Juven	Juvenile tuber	45.74
	Mother_Gastro	Mother tuber of Gastrodia elata	42.22
	Mother_Juven	Mother tuber of Juvenile	30.69