Detail information of GWHGAAEX011338/evm.TU.scaffold_37.81


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|385810803|ref|YP_005847199.1|4.00E-95di- and tricarboxylate transporter [Ignavibacterium album JCM 16511]
KOGKOG12810Na+/dicarboxylate, Na+/tricarboxylate and phosphate transporters
nrgi|672172486|ref|XP_008806335.1|0PREDICTED: tonoplast dicarboxylate transporter-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q8LG88|TDT_ARATH0Tonoplast dicarboxylate transporter
trEMBLtr|A0A067K9K7|A0A067K9K7_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP32916.1}
TAIRAT5G475600tonoplast dicarboxylate transporter

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004321647102167797-
Transcript Sequence

Network for GWHGAAEX011338

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00939.18Na_sulph_symp335082.10E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms86.730
SRR2545915Juvenile tuber52.140
SRP108465SRR5643513five period of Gastrodia elata161.960
SRR5643514five period of Gastrodia elata109.590
SRR5643515five period of Gastrodia elata55.500
SRR5643524five period of Gastrodia elata129.050
SRR5643525five period of Gastrodia elata254.030
SRR5643528five period of Gastrodia elata193.790
SRR5643658five period of Gastrodia elata303.980
SRR5643659five period of Gastrodia elata4.720
SRR5643660five period of Gastrodia elata4.070
SRR5643661five period of Gastrodia elata6.120
SRR5643662five period of Gastrodia elata3.320
SRR5643663five period of Gastrodia elata2.910
SRR5643664five period of Gastrodia elata4.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_193.910
SRR6049655Rhizomagastrodiae_C368-T10_good_1121.730
SRR6049656Rhizomagastrodiae_C368-T07_good_1108.280
SRR6049657Rhizomagastrodiae_C368-T07_good_1139.620
SRR6049658Rhizomagastrodiae_C368-T04_good_1174.120
SRR6049659Rhizomagastrodiae_C368-T04_good_1198.590
SRR6049660Rhizomagastrodiae_C368-T01_good_1126.250
SRR6049661Rhizomagastrodiae_C368-T04_good_1163.600
SRR6049662Rhizomagastrodiae_C368-T01_good_157.530
SRR6049663Rhizomagastrodiae_C368-T01_good_172.700
SRR6049664Rhizomagastrodiae_C368-T10_good_180.810
SRR6049665Rhizomagastrodiae_C368-T10_good_180.810
SRP279888GastroGastrodia elata tuber 10.09
JuvenJuvenile tuber46.02
Mother_GastroMother tuber of Gastrodia elata 429.32
Mother_JuvenMother tuber of Juvenile 190.17