Detail information of GWHGAAEX011345/evm.TU.scaffold_37.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG06981.00E-16Serine/threonine protein phosphatase
nrgi|475613687|gb|EMT28836.1|5.53E-17Putative protein phosphatase 2C 8 [Aegilops tauschii]
Swissprottr|Q5SN75|P2C08_ORYSJ2.00E-18Probable protein phosphatase 2C 8
trEMBLtr|M8CYB0|M8CYB0_AEGTA2.00E-17Uncharacterized protein {ECO:0000313|EMBL:EMT28836.1}
TAIRAT3G114101.00E-16protein phosphatase 2CA

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004323732852411159-
Transcript Sequence

Network for GWHGAAEX011345

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C9662.70E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14497PP2C MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms55.690
SRR2545915Juvenile tuber51.850
SRP108465SRR5643513five period of Gastrodia elata20.050
SRR5643514five period of Gastrodia elata21.430
SRR5643515five period of Gastrodia elata18.870
SRR5643524five period of Gastrodia elata19.100
SRR5643525five period of Gastrodia elata9.990
SRR5643528five period of Gastrodia elata16.780
SRR5643658five period of Gastrodia elata14.390
SRR5643659five period of Gastrodia elata33.070
SRR5643660five period of Gastrodia elata36.170
SRR5643661five period of Gastrodia elata39.180
SRR5643662five period of Gastrodia elata35.690
SRR5643663five period of Gastrodia elata30.600
SRR5643664five period of Gastrodia elata40.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.710
SRR6049655Rhizomagastrodiae_C368-T10_good_156.780
SRR6049656Rhizomagastrodiae_C368-T07_good_118.340
SRR6049657Rhizomagastrodiae_C368-T07_good_115.990
SRR6049658Rhizomagastrodiae_C368-T04_good_139.700
SRR6049659Rhizomagastrodiae_C368-T04_good_140.780
SRR6049660Rhizomagastrodiae_C368-T01_good_123.920
SRR6049661Rhizomagastrodiae_C368-T04_good_122.140
SRR6049662Rhizomagastrodiae_C368-T01_good_113.530
SRR6049663Rhizomagastrodiae_C368-T01_good_119.480
SRR6049664Rhizomagastrodiae_C368-T10_good_118.790
SRR6049665Rhizomagastrodiae_C368-T10_good_118.790
SRP279888GastroGastrodia elata tuber 21.34
JuvenJuvenile tuber6.15
Mother_GastroMother tuber of Gastrodia elata 6.23
Mother_JuvenMother tuber of Juvenile 2.72