Gene detail

Detail information of GWHGAAEX011349/evm.TU.scaffold_37.92

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743760766\|ref\|XP_010938751.1\|	7.72E-68	PREDICTED: uncharacterized protein LOC105057757 [Elaeis guineensis]
trEMBL	tr\|M0U3T9\|M0U3T9_MUSAM	9.00E-67	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P26820_001}
TAIR	AT5G61340	6.00E-30	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	2459384	2461697	-

Transcript Sequence
>GWHTAAEX011349 TTATACATAGCCCAAACATATGAAATTGTCATATCATATGCTAATTCAAGTTGCATATTACTTAATTTCATAAAGAATAGAATAGCACCTCATTCATCTTATATATAAAAGTGAAGTTCAGTGCCCTCTTTTGCCCCCCTTTCAGTAGCCAAGCCAATGGAAAGAGCAAGCAGCATCATAAGAAGCTCCATCCATTCCTTCTTCACAAGCTATCACACATATGCCTCCATAGCCACAGTCCTCATCTTCCCTTCATCAGCTTCCACTCTTCTCTCCAAGTCTCTCATTCCTTCATCACCGTCTTCTTCCCCTTTCCTTCAGTTCATCTCTACTCAAAATACTCCTTTATTTTACACTCTATACCTCAAGTTCTGGCACACAATCCTCACCTTCCTCCTCTCTGTCCCCTCCACCCTCACCTTCCTTTGCCTGGCCAAAGCATCCATAATACAGGCCTCAGTCGGAATCCACCATTGCAAACAATTTTCTCCTTCACTCTCTCCATTCCTTCATCTATACCGCAAGCTCGCCCTCACCCATCTCTTCAGCACCTTTCTTATACTGTCCACCTATGCAATTCTCTTCTTCATCATGCTCCAAGCATTCAGCACCGTAGAACTGCTCTCCTTCAGCTCGGCAAGTATTGTCGCGGCGCTCTCGGCCATCGGTTTCGTCCTCTATTCTGCAATTCTTGCTAATGTTTTTGTGATGTGCAGCCTTGCAAGCATTGTTGCAGCAGTTGAGACCTGCAGCACATATGAGGCTTTTGTCAGAACCTGGATGCTAATAAGGGGAAAGACTGTAGTTGGTTTGTACCTTAGTCTCCCTATTAATTTGTGCATGGCTGCAACAGAGGTGGTGTTTCAAGTGAGAGTGATGAGGCAATACCATCAGACTAATCAATTTGATCTGTCGCTGATGTGTGAGGGCTTCACAATAACTTATATGTATTCCATTCTCACTGTGTTTGAAGTTATCATCAACTGCTGCTTCTACGAGTACTGCAAATATGGGTGTTTTAACAAATATGTGAGTCTGTTTGATTATGAATCAGAGCTAGCAGAAGAAAAGAAAGCAGGCCTACATGTTTGACTAATGAACTTGAATTGAGAATGTTGTCTGTTGATAGCAAGGGGTTGTATCAAGCAGAATGTAGTATATTTCATGAGGAGAAGTACGTGCAGAGATTGTCAAGCATATGTATGGCTTATAGAATGGAAGACTCTAATGTGTGAATTATGAGATTTCAGCAATGCCCTCATAATCCCTTGCTTTTTTACAACTTTTTATCATCTAAAAATATGAGATTTCAGAGCACGCACACACACGCATATATATATATATAACTGTATGTGCAATACAGAAATATGGACGATTGAGATTGTTAAAAAGATTTTAGATTTTTTTTGAATGGCGATCACCACCATTCATATAACATCAATGACCGAAAAATTAAATTGCAGTATATAAAGCGATGAGCAACCAGATTTAGGGGAATTCTGTAGGTCTCCTGAATTCTGATTTTCTTAATGAGACAGAGTATTTGCGACTCTTCTTTTTCAATTCTGCTTCAAAAGCCTATAAGGTGTATCTTATTATTAGGGTTTGTATCTTATCTTTAATTGTTGTTACATCAGATCACAAGTAAGAAAAAACTAATCAGATATTTTTGTTCCTTATTGTATAATTTCTAATGAATTACATACATTTTATCTAATCTATGATCAGTTAGCAAAAAATGGTTTTTATGTGCCTGATTTTTTCAGTTTGTGTGGATTGAAGTAATGAGTATTGTTTTTATGAATCAAGATCATTTAGTAGAATAATTAAATTTTAAGGGTCTCAATAAAATCCTTTTATGCATAAGCAATAGCATGCACATGCAACAATCACAGAATGCACACATTATCTTACAATAATCATCGAAGTAAAAGTTATAGAATACAAAAATTATAGCATCATGAACATATACAATAATCGGAGACTGCACAAATCACAACATCGCATAATGCACAAATAACAAAAATAAGATATTATAGTAATGACAGAAAGTAAAAATCATTAAATGCAAAGATTATAACATACATAAACACAATATACAATAATCACAAACTACACAAATTATAGCATTACATAATGCACAAATCACAATAATATAACGCAAAAGTTATAAGGTGCATAAACAACAATATGCAGCAATCATACACAACACAAATCACGCATTACATAATACATAAATTACAAAAATAAGAGATTATAGTACATAAAAATCATATAACATAAATATTATAGCATATATAAACAACAAAATGCA

Network for GWHGAAEX011349

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.860
SRP064423	SRR2545915	Juvenile tuber	3.380
SRP108465	SRR5643513	five period of Gastrodia elata	22.060
	SRR5643514	five period of Gastrodia elata	21.140
	SRR5643515	five period of Gastrodia elata	14.520
	SRR5643524	five period of Gastrodia elata	15.360
	SRR5643525	five period of Gastrodia elata	1.660
	SRR5643528	five period of Gastrodia elata	1.590
	SRR5643658	five period of Gastrodia elata	0.890
	SRR5643659	five period of Gastrodia elata	11.770
	SRR5643660	five period of Gastrodia elata	8.110
	SRR5643661	five period of Gastrodia elata	7.660
	SRR5643662	five period of Gastrodia elata	10.410
	SRR5643663	five period of Gastrodia elata	6.670
	SRR5643664	five period of Gastrodia elata	11.260
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.610
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	49.410
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.260
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.760
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.890
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.530
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.410
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.340
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.340
SRP279888	Gastro	Gastrodia elata tuber	2.73
	Juven	Juvenile tuber	17.01
	Mother_Gastro	Mother tuber of Gastrodia elata	1.76
	Mother_Juven	Mother tuber of Juvenile	6.92