Gene detail

Detail information of GWHGAAEX011351/evm.TU.scaffold_37.96

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672125040\|ref\|XP_008785928.1\|	1.00E-61	PREDICTED: uncharacterized protein LOC103704438 [Phoenix dactylifera]
trEMBL	tr\|A0A068TWF9\|A0A068TWF9_COFCA	3.00E-57	Coffea canephora
TAIR	AT3G11810	7.00E-51	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000043	2487148	2488664	+

Transcript Sequence
>GWHTAAEX011351 CTTTTCCATATTTGAATTTTAAAATCTGCAATCCCTAAAAAAAATTGTATTGAAGATTTCCGAAGCTCCAAATCCGTCAAATTTAACCCCTCATCGTCATCCTCTTCGAGATCCATGGCGACCACCAAATCTTCCTACTCATGGCCGGCCATGCTCGCCGGAGCTCTCTCTGAATCCTTCCGCGTCGTCTCCGGTCACTCCCGTCACTTCCTCGCACTCACTGTCCTCTTCCTTCTCCCCCTTTCCTCCGTCCTCATCGCTTCTCCTTCCCTCCTCCCTCTCGTCATTCACCATCGCCATTCCATCCATCCTCAATCCCTCCTCCGCTCTGATCCCCCCTCTCCCGATATCATTAAAGCCGCAATCATCGCCGCAGCCACAGCCGTCATCTTCCTCTCCATCGCCGCTGCCGCCACAGCTGCGGTCACGCGCAGCGTCAATCATGGATTCTACGGTCGACCCGTCAAGATCCTTCCTAACCTTCGATCTATTCACGTCCCTGTTCTCCGCCTACTGGCTACCCTCATTTGCGGACTTCTAATCTTCTCCACGATAGTCGCTCTGATCGTCTCTCTATGCCTTCTCCTCCTCTTCATCCTTTCTCTCCTCGGGGTTGAATCTGGATCTGTTTCTCCTTACAGCTTCGCCGCAGTGGTTGTTGCCATCACAATCACTCGTCTGCATTTAGAATGGTGCCTCGCAGGCGCAATCTCCGTGATGGAGTCAAGCTGGGGTTTCGCGCCGTTGAAAAGGAGCGGTGAGTTGCTCGATGGGATGTGGATGGCGGCCATCTGTCTTTGGGCATCTTTTGGGGTTGGAATCGGGCTCGCTCTGTGGGGGTTTGGGCTCTGGGGGATTCCAGGTGGCGACGGGAGCTTTTATGACGTGATACCGGTGGTTGGGAAGACCGTGCTGGGCTCTGCGCTCACAGCTTTGCTGCTTTTGTACATTCTTGTGACGCATGCGGCACTGTATTTGTACTGCAAGGCGGTGCACGGGGAGCTTCCAGGGGAGATAGTAGAGGAGTTCGCTTCAGAGTATGTTACTCTGCCGTTTGATGATACCAGGGTGCCTCATGTTATTTCTGTGATTCTGCGGTAAAGGAAAAGAGCTTGTGGTTTATGCAGGTGTGGTTCCTTCACTTCGGTGAACTGTTATTTTTTCTATTTTGAGGGTATGAAGTAGGAACTTGTGATGTTTGGGCTATTGCCTCTAGATGCAAATTTGTTGTATGAAACCATAATGTATAGTGGGTTACTTCTGTACATAAATGTTCACGATTCAGTGTGCACAATGCCTGCTAATGCTCTGTACAATCTAGTGTTCCCTTATACTTAAAAAAGCTTGTAACATTATATAAGGTAAAGGTTGTCTGCTTCAATGTAGATTAAAACATTTGTGATTGGTAGACTTTATGTATTCTGTTTATAGCAGGCAGGTCTTGTCCATGGATGAAAATCTTAAAATGCATTTTTTTGATACAATAAAGTGACCATTGAATCTTGTTATTGCAATGT

Network for GWHGAAEX011351

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.050
SRP064423	SRR2545915	Juvenile tuber	20.370
SRP108465	SRR5643513	five period of Gastrodia elata	42.510
	SRR5643514	five period of Gastrodia elata	34.470
	SRR5643515	five period of Gastrodia elata	38.220
	SRR5643524	five period of Gastrodia elata	39.690
	SRR5643525	five period of Gastrodia elata	135.730
	SRR5643528	five period of Gastrodia elata	96.290
	SRR5643658	five period of Gastrodia elata	156.550
	SRR5643659	five period of Gastrodia elata	46.800
	SRR5643660	five period of Gastrodia elata	45.900
	SRR5643661	five period of Gastrodia elata	44.050
	SRR5643662	five period of Gastrodia elata	55.010
	SRR5643663	five period of Gastrodia elata	50.950
	SRR5643664	five period of Gastrodia elata	58.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	37.350
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	50.970
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	37.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	44.310
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	40.590
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	50.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	38.980
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	38.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.450
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	27.910
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	38.990
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	38.990
SRP279888	Gastro	Gastrodia elata tuber	40.55
	Juven	Juvenile tuber	37.40
	Mother_Gastro	Mother tuber of Gastrodia elata	63.25
	Mother_Juven	Mother tuber of Juvenile	45.68