Detail information of GWHGAAEX011354/evm.TU.scaffold_37.103


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG11245.00E-114FOG: TPR repeat
nrgi|695023884|ref|XP_009399134.1|7.20E-157PREDICTED: tetratricopeptide repeat protein 13 [Musa acuminata subsp. malaccensis]
Swissprottr|F4JS25|SRFR1_ARATH2.00E-122Suppressor of RPS4-RLD 1 {ECO:0000303|PubMed:15469494}
trEMBLtr|M0SUT2|M0SUT2_MUSAM2.00E-162Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P01530_001}
TAIRAT4G374605.00E-114Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004326074592632962-
Transcript Sequence

Network for GWHGAAEX011354

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.300
SRR2545915Juvenile tuber28.500
SRP108465SRR5643513five period of Gastrodia elata20.140
SRR5643514five period of Gastrodia elata24.790
SRR5643515five period of Gastrodia elata17.030
SRR5643524five period of Gastrodia elata19.810
SRR5643525five period of Gastrodia elata36.250
SRR5643528five period of Gastrodia elata33.990
SRR5643658five period of Gastrodia elata38.210
SRR5643659five period of Gastrodia elata19.860
SRR5643660five period of Gastrodia elata22.850
SRR5643661five period of Gastrodia elata23.720
SRR5643662five period of Gastrodia elata19.560
SRR5643663five period of Gastrodia elata20.940
SRR5643664five period of Gastrodia elata23.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.960
SRR6049655Rhizomagastrodiae_C368-T10_good_119.880
SRR6049656Rhizomagastrodiae_C368-T07_good_122.400
SRR6049657Rhizomagastrodiae_C368-T07_good_124.010
SRR6049658Rhizomagastrodiae_C368-T04_good_124.070
SRR6049659Rhizomagastrodiae_C368-T04_good_127.850
SRR6049660Rhizomagastrodiae_C368-T01_good_123.200
SRR6049661Rhizomagastrodiae_C368-T04_good_119.740
SRR6049662Rhizomagastrodiae_C368-T01_good_118.170
SRR6049663Rhizomagastrodiae_C368-T01_good_120.070
SRR6049664Rhizomagastrodiae_C368-T10_good_117.940
SRR6049665Rhizomagastrodiae_C368-T10_good_117.940
SRP279888GastroGastrodia elata tuber 38.19
JuvenJuvenile tuber49.87
Mother_GastroMother tuber of Gastrodia elata 40.10
Mother_JuvenMother tuber of Juvenile 49.78