Detail information of GWHGAAEX011357/evm.TU.scaffold_37.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31312.00E-56Uncharacterized conserved protein
nrgi|743781111|ref|XP_010920766.1|4.86E-99PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Elaeis guineensis]
Swissprottr|Q8GWZ6|SRR1_ARATH5.00E-57Protein SENSITIVITY TO RED LIGHT REDUCED 1
trEMBLtr|M0REZ4|M0REZ4_MUSAM1.00E-80Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P03170_001}
TAIRAT5G595602.00E-56sensitivity to red light reduced protein (SRR1)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004327485232757569+
Transcript Sequence

Network for GWHGAAEX011357

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07985.11SRR11031561.30E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.600
SRR2545915Juvenile tuber7.740
SRP108465SRR5643513five period of Gastrodia elata13.380
SRR5643514five period of Gastrodia elata10.430
SRR5643515five period of Gastrodia elata13.310
SRR5643524five period of Gastrodia elata13.200
SRR5643525five period of Gastrodia elata9.150
SRR5643528five period of Gastrodia elata7.810
SRR5643658five period of Gastrodia elata5.540
SRR5643659five period of Gastrodia elata15.230
SRR5643660five period of Gastrodia elata15.120
SRR5643661five period of Gastrodia elata16.100
SRR5643662five period of Gastrodia elata14.760
SRR5643663five period of Gastrodia elata14.440
SRR5643664five period of Gastrodia elata14.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.880
SRR6049655Rhizomagastrodiae_C368-T10_good_112.960
SRR6049656Rhizomagastrodiae_C368-T07_good_116.780
SRR6049657Rhizomagastrodiae_C368-T07_good_111.490
SRR6049658Rhizomagastrodiae_C368-T04_good_112.220
SRR6049659Rhizomagastrodiae_C368-T04_good_114.670
SRR6049660Rhizomagastrodiae_C368-T01_good_111.410
SRR6049661Rhizomagastrodiae_C368-T04_good_17.630
SRR6049662Rhizomagastrodiae_C368-T01_good_117.240
SRR6049663Rhizomagastrodiae_C368-T01_good_118.210
SRR6049664Rhizomagastrodiae_C368-T10_good_116.900
SRR6049665Rhizomagastrodiae_C368-T10_good_116.900
SRP279888GastroGastrodia elata tuber 13.48
JuvenJuvenile tuber13.71
Mother_GastroMother tuber of Gastrodia elata 11.42
Mother_JuvenMother tuber of Juvenile 8.04