Detail information of GWHGAAEX011360/evm.TU.scaffold_37.110


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720065748|ref|XP_010276359.1|7.64E-150PREDICTED: uncharacterized protein LOC104611127 [Nelumbo nucifera]
trEMBLtr|A2Q3B0|A2Q3B0_MEDTR1.00E-144Putative uncharacterized protein {ECO:0000313|EMBL:ABN08110.1}
TAIRAT2G442602.00E-130Plant protein of unknown function (DUF946)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004328716002880050+
Transcript Sequence

Network for GWHGAAEX011360

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06101.10Vps62225164.20E-160
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.510
SRR2545915Juvenile tuber3.640
SRP108465SRR5643513five period of Gastrodia elata22.040
SRR5643514five period of Gastrodia elata23.890
SRR5643515five period of Gastrodia elata17.890
SRR5643524five period of Gastrodia elata24.530
SRR5643525five period of Gastrodia elata33.480
SRR5643528five period of Gastrodia elata24.490
SRR5643658five period of Gastrodia elata23.940
SRR5643659five period of Gastrodia elata3.990
SRR5643660five period of Gastrodia elata5.040
SRR5643661five period of Gastrodia elata5.500
SRR5643662five period of Gastrodia elata8.080
SRR5643663five period of Gastrodia elata6.590
SRR5643664five period of Gastrodia elata7.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.210
SRR6049655Rhizomagastrodiae_C368-T10_good_113.070
SRR6049656Rhizomagastrodiae_C368-T07_good_19.380
SRR6049657Rhizomagastrodiae_C368-T07_good_18.050
SRR6049658Rhizomagastrodiae_C368-T04_good_17.420
SRR6049659Rhizomagastrodiae_C368-T04_good_15.820
SRR6049660Rhizomagastrodiae_C368-T01_good_17.350
SRR6049661Rhizomagastrodiae_C368-T04_good_17.360
SRR6049662Rhizomagastrodiae_C368-T01_good_128.170
SRR6049663Rhizomagastrodiae_C368-T01_good_119.330
SRR6049664Rhizomagastrodiae_C368-T10_good_112.560
SRR6049665Rhizomagastrodiae_C368-T10_good_112.560
SRP279888GastroGastrodia elata tuber 6.87
JuvenJuvenile tuber9.43
Mother_GastroMother tuber of Gastrodia elata 4.96
Mother_JuvenMother tuber of Juvenile 10.20