Detail information of GWHGAAEX011364/evm.TU.scaffold_37.115


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG39283.00E-174Mitochondrial ribosome small subunit component, mediator of apoptosis DAP3
nrgi|743793083|ref|XP_010923836.1|0PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Elaeis guineensis]
trEMBLtr|J3MJB4|J3MJB4_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB07G14960.1}
TAIRAT1G168703.00E-174mitochondrial 28S ribosomal protein S29-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004328823552922491-
Transcript Sequence

Network for GWHGAAEX011364

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10236.8DAP31453642.30E-28
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms72.460
SRR2545915Juvenile tuber82.940
SRP108465SRR5643513five period of Gastrodia elata45.150
SRR5643514five period of Gastrodia elata41.700
SRR5643515five period of Gastrodia elata39.320
SRR5643524five period of Gastrodia elata42.200
SRR5643525five period of Gastrodia elata34.970
SRR5643528five period of Gastrodia elata33.570
SRR5643658five period of Gastrodia elata36.860
SRR5643659five period of Gastrodia elata47.160
SRR5643660five period of Gastrodia elata49.580
SRR5643661five period of Gastrodia elata51.380
SRR5643662five period of Gastrodia elata53.480
SRR5643663five period of Gastrodia elata50.460
SRR5643664five period of Gastrodia elata58.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.080
SRR6049655Rhizomagastrodiae_C368-T10_good_146.260
SRR6049656Rhizomagastrodiae_C368-T07_good_147.020
SRR6049657Rhizomagastrodiae_C368-T07_good_150.600
SRR6049658Rhizomagastrodiae_C368-T04_good_147.320
SRR6049659Rhizomagastrodiae_C368-T04_good_149.760
SRR6049660Rhizomagastrodiae_C368-T01_good_152.880
SRR6049661Rhizomagastrodiae_C368-T04_good_148.890
SRR6049662Rhizomagastrodiae_C368-T01_good_140.760
SRR6049663Rhizomagastrodiae_C368-T01_good_144.050
SRR6049664Rhizomagastrodiae_C368-T10_good_147.850
SRR6049665Rhizomagastrodiae_C368-T10_good_147.850
SRP279888GastroGastrodia elata tuber 97.61
JuvenJuvenile tuber63.01
Mother_GastroMother tuber of Gastrodia elata 47.85
Mother_JuvenMother tuber of Juvenile 57.62