Detail information of GWHGAAEX011366/evm.TU.scaffold_37.119


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08596.00E-113Synaptobrevin/VAMP-like protein
nrgi|697159792|ref|XP_009588661.1|1.29E-121PREDICTED: vesicle-associated membrane protein 721 [Nicotiana tomentosiformis]
Swissprottr|Q9MAS5|VA726_ARATH2.00E-113Putative vesicle-associated membrane protein 726
trEMBLtr|W9S386|W9S386_9ROSA4.00E-121Putative vesicle-associated membrane protein 726 {ECO:0000313|EMBL:EXC24180.1}
TAIRAT1G047606.00E-113vesicle-associated membrane protein 726

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004330385183041346+
Transcript Sequence

Network for GWHGAAEX011366

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13774.5Longin321103.20E-21
PF00957.20Synaptobrevin1292156.30E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016192Biological Processvesicle-mediated transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.800
SRR2545915Juvenile tuber27.230
SRP108465SRR5643513five period of Gastrodia elata26.700
SRR5643514five period of Gastrodia elata25.050
SRR5643515five period of Gastrodia elata21.150
SRR5643524five period of Gastrodia elata27.850
SRR5643525five period of Gastrodia elata32.540
SRR5643528five period of Gastrodia elata39.200
SRR5643658five period of Gastrodia elata34.060
SRR5643659five period of Gastrodia elata25.510
SRR5643660five period of Gastrodia elata19.950
SRR5643661five period of Gastrodia elata25.950
SRR5643662five period of Gastrodia elata26.000
SRR5643663five period of Gastrodia elata22.270
SRR5643664five period of Gastrodia elata26.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.830
SRR6049655Rhizomagastrodiae_C368-T10_good_140.470
SRR6049656Rhizomagastrodiae_C368-T07_good_125.780
SRR6049657Rhizomagastrodiae_C368-T07_good_119.010
SRR6049658Rhizomagastrodiae_C368-T04_good_123.360
SRR6049659Rhizomagastrodiae_C368-T04_good_121.560
SRR6049660Rhizomagastrodiae_C368-T01_good_122.640
SRR6049661Rhizomagastrodiae_C368-T04_good_126.410
SRR6049662Rhizomagastrodiae_C368-T01_good_136.550
SRR6049663Rhizomagastrodiae_C368-T01_good_132.960
SRR6049664Rhizomagastrodiae_C368-T10_good_135.650
SRR6049665Rhizomagastrodiae_C368-T10_good_135.650
SRP279888GastroGastrodia elata tuber 49.00
JuvenJuvenile tuber39.52
Mother_GastroMother tuber of Gastrodia elata 43.81
Mother_JuvenMother tuber of Juvenile 29.05