Detail information of GWHGAAEX011368/evm.TU.scaffold_37.121
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2287 | 0 | Galactosyltransferases |
| nr | gi|672197679|ref|XP_008777126.1| | 0 | PREDICTED: probable beta-1,3-galactosyltransferase 19 [Phoenix dactylifera] |
| Swissprot | tr|Q9LV16|B3GTJ_ARATH | 0 | Probable beta-1,3-galactosyltransferase 19 |
| trEMBL | tr|F6HPH6|F6HPH6_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB56604.1} |
| TAIR | AT5G62620 | 0 | Galactosyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000043 | 3077530 | 3085004 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX011368
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00337.21 | Gal-bind_lectin | 171 | 378 | 1.10E-48 |
| PF01762.20 | Galactosyl_T | 426 | 605 | 6.00E-32 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0030246 | Molecular Function | carbohydrate binding |
| GO:0008378 | Molecular Function | galactosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.090 |
| SRR2545915 | Juvenile tuber | 14.890 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.820 |
| SRR5643514 | five period of Gastrodia elata | 16.500 | |
| SRR5643515 | five period of Gastrodia elata | 19.390 | |
| SRR5643524 | five period of Gastrodia elata | 18.640 | |
| SRR5643525 | five period of Gastrodia elata | 17.780 | |
| SRR5643528 | five period of Gastrodia elata | 18.290 | |
| SRR5643658 | five period of Gastrodia elata | 12.330 | |
| SRR5643659 | five period of Gastrodia elata | 16.590 | |
| SRR5643660 | five period of Gastrodia elata | 14.770 | |
| SRR5643661 | five period of Gastrodia elata | 16.940 | |
| SRR5643662 | five period of Gastrodia elata | 18.730 | |
| SRR5643663 | five period of Gastrodia elata | 14.550 | |
| SRR5643664 | five period of Gastrodia elata | 17.290 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.490 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 20.270 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 21.090 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 16.790 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 18.050 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 20.820 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.500 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 18.010 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.280 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.030 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.700 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.700 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 18.04 |
| Juven | Juvenile tuber | 25.76 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 30.38 | |
| Mother_Juven | Mother tuber of Juvenile | 32.07 |